Construct: ORF ccsbBroad304_10900

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001739.1_s304c1, BRDN0000407979
Derived from:
ccsbBroadEn_10900
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CFI (3426)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10900
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3426 CFI complement factor I XM_006714210.4 68% 66.2% (many diffs)
2 human 3426 CFI complement factor I XM_017008166.2 67.5% 65.7% (many diffs)
3 human 3426 CFI complement factor I XM_017008164.2 66% 64.3% (many diffs)
4 human 3426 CFI complement factor I XM_011531920.2 65.1% 63.4% (many diffs)
5 human 3426 CFI complement factor I XM_017008165.2 64.8% 63.2% (many diffs)
6 human 3426 CFI complement factor I NM_000204.4 62% 60.5% (many diffs)
7 human 3426 CFI complement factor I NM_001318057.2 61.1% 59.5% (many diffs)
8 human 3426 CFI complement factor I NM_001331035.2 60.8% 59.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1197
ORF length:
1131
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa gcttcttcat gttttcctgt tatttctgtg cttccactta aggttttgca
121aggtcactta tacatctcaa gaggatctgg tggagaaaaa gtgcttagca aaaaaatata
181ctcacctctc ctgcgataaa gtcttctgcc agccatggca gagatgcatt gagggcacct
241gtgtttgtaa actaccgtat cagtgcccaa agaatggcac tgcagtgtgt gcaactaaca
301ggagaagctt cccaacatac tgtcaacaaa agagtttgga atgtcttcat ccagggacaa
361agtttttaaa taacggaaca tgcacagccg aaggaaagtt tagtgtttcc ttgaagcatg
421gaaatacaga ttcagaggga atagttgaag taaaacttgt ggaccaagat aagacaatgt
481tcatatgcaa aagcagctgg agcatgaggg aagccaacgt ggcctgcctt gaccttgggt
541ttcaacaagg tgctgatact caaagaaggt ttaagttgtc tgatctctct ataaattcca
601ctgaatgtct acatgtgcat tgccgaggat tagagaccag tttggctgaa tgtactttta
661ctaagagaag aactatgggt taccaggatt tcgctgatgt ggtttgttat acacagaaag
721cagattctcc aatggatgac ttctttcagt gtgtgaatgg gaaatacatt tctcagatga
781aagcctgtga tggtatcaat gattgtggag accaaagtga tgaactgtgt tgtaaagcat
841gccaaggcaa aggcttccat tgcaaatcgg gtgtttgcat tccaagccag tatcaatgca
901atggtgaggt ggactgcatt acaggggaag atgaagttgg ctgtgcaggc tttgcatctg
961tggctcaaga agaaacagaa attttgactg ctgacatgga tgcagaaaga agacggataa
1021aatcattatt acctaaacta tcttgtggag ttaaaaacag aatgcacatt cgaaggaaac
1081gaattgtggg aggaaagcga gcacaactgg gaaaaatgaa gcaaatctca ttggatattt
1141ttaaaggtct ccacagagtt tatgccatat tggaattttg ttgtataatt ctcaaatacc
1201caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
1261ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
1321tta

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