Construct: ORF ccsbBroad304_11129

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002129.1_s304c1, BRDN0000408938
Derived from:
ccsbBroadEn_11129
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SH3GL2 (6456)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11129
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6456 SH3GL2 SH3 domain containing GRB2 ... NM_003026.5 79.1% 78.9% 517A>G;838_1056del
2 human 6456 SH3GL2 SH3 domain containing GRB2 ... XM_011518005.3 69.9% 68% (many diffs)
3 human 6456 SH3GL2 SH3 domain containing GRB2 ... XR_001746364.2 6.5% (many diffs)
4 mouse 20404 Sh3gl2 SH3-domain GRB2-like 2 NM_019535.2 71.1% 78.4% (many diffs)
5 mouse 20404 Sh3gl2 SH3-domain GRB2-like 2 XM_006537710.2 61.9% 68.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
903
ORF length:
837
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc ggtggccggc ctcaagaagc agttccataa agccactcag aaagtgagtg
121agaaggttgg aggagctgaa ggaaccaagc tagatgatga cttcaaagag atggaaagga
181aagtggatgt caccagcagg gctgtgatgg aaataatgac taaaacaatt gaataccttc
241aacccaatcc agcttccaga gctaagctca gcatgatcaa caccatgtca aaaatccgtg
301gccaggagaa ggggccaggc tatcctcagg cagaggcgct gctggcagag gccatgctca
361aatttggaag agagcttgga gatgattgca actttggccc agcacttggt gaggtcgggg
421aggccatgcg ggaactgtcg gaggtcaaag actctttgga catagaagtg aagcagaact
481tcattgaccc tcttcagaat cttcatgaca aagatcttag ggaaattcaa catcatctaa
541agaagttgga gggtcgacgc ctggattttg attataagaa ggaacgacaa ggcaagattc
601cggatgaaga gcttcgtcaa gctctagaga aatttgatga gtctaaggaa attgctgagt
661caagcatgtt caatctcttg gagatggata ttgaacaagt gagccagctc tctgcacttg
721tgcaagctca gctggagtac cacaagcagg cagtccagat cctgcagcaa gtcacggtca
781gactggaaga aagaataaga caggcttcat ctcagcctag aagggaatat caacctaaac
841cacgaatgag cctggagttt ccaactggag acagtactca gcccaatggg ggtctctccc
901actacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
961tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
1021tctggatta

Download FASTA (ORF) (Full)