Construct: ORF ccsbBroad304_11780

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014722.1_s304c1, BRDN0000402698
Derived from:
ccsbBroadEn_11780
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC28A (25901)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11780
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25901 CCDC28A coiled-coil domain containi... NM_015439.2 47.4% 47.4% 1_432del
2 human 25901 CCDC28A coiled-coil domain containi... XM_011535728.3 19.5% 19.7% 1_432del;594_594delTins229
3 mouse 215814 Ccdc28a coiled-coil domain containi... NM_144820.3 60.5% 67.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
456
ORF length:
390
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa agaaaagacc aaacctcagg gtggagaggg caaaggcgct cagtcaactc
121cgatccagca ctccttcctc actgatgtct cagatgttca ggagatggag agagggctgc
181tcagtctttt gaatgatttc cactctggaa aacttcaagc atttggaaat gaatgttcca
241ttgaacagat ggaacatgtt cggggaatgc aggagaaatt agctcgcttg aatttggagc
301tctatgggga gttagaggaa cttcctgagg ataagagaaa aacagccagt gactccaatc
361tggataggct tctgtcagat ttagaagaat tgaattcttc catacaaaaa ctccatttgg
421cagatgcaca agatgttcca aatacttctg ctagctaccc aactttcttg tacaaagtgg
481ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
541ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)