Construct: ORF ccsbBroad304_11923

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001162.1_s304c1, BRDN0000409536
Derived from:
ccsbBroadEn_11923
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PODXL2 (50512)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11923
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 50512 PODXL2 podocalyxin like 2 NM_015720.4 87.4% 87.4% 1003_1230del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1653
ORF length:
1587
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg ccggctgctg cgggccgccc ggctgccgcc gctgctttcg ccgctgctgc
121ttctgctggt tgggggagcg ttcctgggtg cctgtgtggc tgggtctgat gagcctggcc
181cagagggcct cacctccacc tccctgctag acctcctgct gcccactggc ttggagccac
241tggactcaga ggagcctagt gagaccatgg gcctgggagc tgggctggga gcccctggct
301caggcttccc cagcgaagag aatgaagagt ctcggattct gcagccacca cagtacttct
361gggaagagga ggaagagctg aatgactcaa gtctggacct gggacccact gcagattatg
421tttttcctga cttaactgag aaggcaggtt ccattgaaga caccagccag gctcaagagc
481tgccaaacct cccctctccc ttgcccaaga tgaatctggt tgagcctccc tggcatatgc
541ctcccagaga ggaggaagaa gaggaagagg aagaggagga gagggagaag gaagaggtag
601agaaacaaga ggaggaggaa gaggaggagc tgctccctgt gaatggatcc caagaagaag
661ccaagcctca ggtccgtgac ttttctctca ccagcagcag ccagacccca ggggccacca
721aaagcaggca tgaagactcc ggggaccagg cctcatcagg tgtggaggtg gagagcagca
781tggggcccag cttgctgctg ccttcagtca ccccaactac agtgactccg ggggaccagg
841actccaccag ccaagaggca gaggccacag tgctgccagc tgcagggctt ggggtagagt
901tcgaggctcc tcaggaagca agcgaggaag ccactgcagg agcagctggt ttgtctggcc
961agcacgagga ggtgccggcc ttgccttcat tccctcaaac cacagctccc agtggggccg
1021agcacccaga tgaagatccc cttggctcta gaacctcagc ctcttcccca cagctcctgg
1081ccctggtgga agaggtgctg ccccgccatg gcagtggcca ccatggggcc tggcacatct
1141ctctgagcaa gcccagcgag aaggagcagc accttctcat gacactggtg ggcgagcagg
1201gggtggtgcc cactcaagat gtcctttcca tgctgggtga catccgcagg agcctggagg
1261agattggcat ccagaactat tccacaacca gcagctgcca ggcgcgggcc agccaggtgc
1321gcagcgacta cggcacgctc ttcgtggtgc tggtggtcat tggggccatc tgcatcatca
1381tcattgcgct tggcctgctc tacaactgct ggcagcgccg gctgcccaag ctcaagcacg
1441tgtcgcacgg cgaggagctg cgcttcgtgg agaacggctg ccacgacaac cccacgctgg
1501acgtggccag cgacagccag tcggagatgc aggagaagca ccccagcctg aacggcggcg
1561gggccctcaa cggcccgggg agctgggggg cgctcatggg gggcaagcgg gaccccgagg
1621actcggacgt gttcgaggag gacacgcacc tgtgcccaac tttcttgtac aaagtggttg
1681gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1741accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)