Construct: ORF ccsbBroad304_12151

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015654.1_s304c1, BRDN0000410205
Derived from:
ccsbBroadEn_12151
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNF31 (55072)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12151
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55072 RNF31 ring finger protein 31 NM_001310332.1 63.9% 63.9% 1_996del
2 human 55072 RNF31 ring finger protein 31 NM_017999.5 54.9% 54.9% 1_1449del
3 mouse 268749 Rnf31 ring finger protein 31 NM_194346.2 48.7% 51% (many diffs)
4 mouse 268749 Rnf31 ring finger protein 31 XM_006519062.2 48.5% 50.8% (many diffs)
5 mouse 268749 Rnf31 ring finger protein 31 XR_383184.1 42.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1833
ORF length:
1767
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcg ggaagaaggc ctccagctag tgagcatgat ccgggaaggg gaagccgcag
121gtgcctgtcc agaggagatc ttctcggctc tgcagtactc gggcactgag gtgcctctgc
181agtggttgcg ctcagaactg ccctacgtcc tggagatggt ggctgagctg gctggacagc
241aggaccctgg gctgggtgcc ttttcctgtc aggaggcccg gagagcctgg ctggatcgtc
301atggcaacct tgatgaagct gtggaggagt gtgtgaggac caggcgaagg aaggtgcagg
361agctccagtc tctaggcttt gggcctgagg aggggtctct ccaggcattg ttccagcacg
421gaggtgatgt gtcacgggcc ctgactgagc tacagcgcca acgcctagag cccttccgcc
481agcgcctctg ggacagtggc cctgagccca ccccttcctg ggatgggcca gacaagcaga
541gcctggtcag gcggcttttg gcagtctacg cactccccag ctggggccgg gcagagctgg
601cactgtcact gctgcaggag acacccagga actatgagtt gggggatgtg gtagaagctg
661tgaggcacag ccaggaccgg gccttcctgc gccgcttgct tgcccaggag tgtgccgtgt
721gtggctgggc cctgccccac aaccggatgc aggccctgac ttcctgtgag tgcaccatct
781gtcctgactg cttccgccag cacttcacca tcgccttgaa ggagaagcac atcacagaca
841tggtgtgccc tgcctgtggc cgccccgacc tcaccgatga cacacagttg ctcagctact
901tctctaccct tgacatccag cttcgcgaga gcctagagcc agatgcctat gcgttgttcc
961ataagaagct gaccgagggt gtgctgatgc gggaccccaa gttcttgtgg tgtgcccagt
1021gctcctttgg cttcatatat gagcgtgagc agctggaggc aacttgtccc cagtgtcacc
1081agaccttctg tgtgcgctgc aagcgccagt gggaggagca gcaccgaggt cggagctgtg
1141aggacttcca gaactggaaa cgcatgaacg acccagaata ccaggcccag ggcctagcaa
1201tgtatcttca ggaaaacggc attgactgcc ccaaatgcaa gttctcgtac gccctggccc
1261gaggaggctg catgcacttt cactgtaccc agtgccgcca ccagttctgc agcggctgct
1321acaatgcctt ttacgccaag aataaatgtc cagagcctaa ctgcagggtg aaaaagtccc
1381tgcacggcca ccaccctcga gactgcctct tctacctgcg ggactggact gctctccggc
1441ttcagaagct gctacaggac aataacgtca tgtttaatac agagcctcca gctggggccc
1501gggcagtccc tggaggcggc tgccgagtga tagagcagaa ggaggttccc aatgggctca
1561gggacgaagc ttgtggcaag gaaactccag ctggctatgc cggcctgtgc caggcacact
1621acaaagagta tcttgtgagc ctcatcaatg cccactcgct ggacccagcc accttgtatg
1681aggtggaaga gctggagacg gccactgagc gctacctgca cgtacgcccc cagcctttgg
1741ctggagagga tccccctgct taccaggccc gcttgttaca gaagctgaca gaagaggtac
1801ccttgggaca gagtatcccc cgcaggcgga agtacccaac tttcttgtac aaagtggttg
1861gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1921accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)