Construct: ORF ccsbBroad304_12308

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009393.1_s304c1, BRDN0000403659
Derived from:
ccsbBroadEn_12308
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UBQLN4 (56893)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12308
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 56893 UBQLN4 ubiquilin 4 NM_001304342.2 10.6% 10.6% 1_1557del
2 human 56893 UBQLN4 ubiquilin 4 NM_020131.5 10.3% 10.3% 1_1617del
3 human 56893 UBQLN4 ubiquilin 4 XR_921895.3 5.6% 1_1413del;1600_3279del
4 mouse 94232 Ubqln4 ubiquilin 4 XM_006502396.2 10.2% 10.8% (many diffs)
5 mouse 94232 Ubqln4 ubiquilin 4 NM_033526.2 9.3% 9.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
252
ORF length:
186
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat ccagcttttg gctggaagtg gaaactcaca ggtgcagacg ccagaagtga
121gatttcagca gcagctggag cagctcaact ccatgggctt catcaatcgt gaggctaacc
181tgcaggccct gattgccaca ggaggggaca tcaacgcagc tatcgagaga ctgctgggct
241cccagctctc ctacccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
301tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
361caatcaacct ctggatta

Download FASTA (ORF) (Full)