Construct: ORF ccsbBroad304_12341

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005771.1_s304c1, BRDN0000401489
Derived from:
ccsbBroadEn_12341
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF287 (57336)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12341
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57336 ZNF287 zinc finger protein 287 NM_001346167.1 99% 99% 1_21del
2 human 57336 ZNF287 zinc finger protein 287 NM_001346168.1 99% 99% 1_21del
3 human 57336 ZNF287 zinc finger protein 287 NM_001346169.1 99% 99% 1_21del
4 human 57336 ZNF287 zinc finger protein 287 NM_020653.4 99% 99% 1_21del
5 human 57336 ZNF287 zinc finger protein 287 XM_011523968.2 99% 99% 1_21del
6 human 57336 ZNF287 zinc finger protein 287 NM_001346170.1 87.4% 81.2% (many diffs)
7 human 57336 ZNF287 zinc finger protein 287 NM_001346171.1 78.5% 78.5% 0_1ins486
8 mouse 170740 Zfp287 zinc finger protein 287 XM_017314304.1 63.5% 65.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2331
ORF length:
2262
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gaacagttct tcacgttctc aaatccttct aaggtggaag tcagacaagg
121ctcagagtgg accctacaat gttgagaagg aaatccttac ttcaagattc ttgcgtgaca
181ctgagacctg tcgacagaat tttaggaatt ttccataccc agacctggct ggtcctcgaa
241aggcattgag tcaactccga gagctctgcc ttaagtggct gagacctgag attcactcaa
301aggaacaaat tttggagctg ctggtgctgg agcaattcct gaccatcctg cctggtgagg
361ttaggacttg ggtaaagtcc cagtatccag agagcagcga ggaagcagtg actctggtgg
421aggatttgac tcagattcta gaagaggaag ctcctcaaaa ctctaccctt tcccaagata
481ccccagagga agaccccaga ggaaaacatg ctttccagac aggatggcta aatgacttgg
541tgaccaaaga atcgatgaca ttcaaagatg tggctgtaga catcacccag gaggactggg
601agttaatgcg tcctgtgcag aaggaattat acaagactgt gacgttacag aactattgga
661acatggtttc tctgggactt acagtgtaca gaccaactgt gattcccata ttggaagaac
721catggatggt gataaaagaa attttagaag gccctagtcc agaatgggaa actaaagccc
781aagcatgtac tccagtggag gatatgtcta aactcacaaa ggaagaaacc cataccatca
841aattagaaga ctcatatgac tacgatgata gactagagag gcgaggaaaa ggtggcttct
901ggaaaattca cactgatgaa agaggtttca gtttgaagtc agtcctttca caagaatatg
961atcctacaga agaatgtctt agtaaatatg atatatatag aaataatttt gaaaagcatt
1021caaacctaat tgtacagttt gatacccaat tagataataa aacttctgtg tataatgaag
1081gcagggcaac cttcaatcat gtctcatatg gtattgtaca taggaaaata cttcctggag
1141agaagcctta caagtgtaat gtgtgtggga aaaaatttag gaaataccca tccctcctga
1201aacaccaaag tacccatgcc aaagagaaat cgtatgaatg tgaagaatgt gggaaagagt
1261ttaggcatat ctcatccctt attgcacatc agagaatgca cactggagaa aaaccatatg
1321aatgccacca gtgtggtaaa gccttcagcc agcgtgcaca ccttactata catcagagaa
1381ttcatactgg agagaaaccc tataagtgtg atgactgtgg gaaagacttc agtcagcgtg
1441cacaccttac catccatcaa aggacacata ctggagagaa accatataaa tgcttggaat
1501gtggtaaaac cttcagtcat agttcatcac tgattaatca tcagagagtt catactggag
1561aaaaacctta tatatgcaat gaatgtggga agactttcag tcagagtaca caccttcttc
1621agcatcaaaa aatacatact gggaagaaac catataaatg caatgaatgt tggaaagtgt
1681ttagtcagag tacttacctt attcgacatc agagaattca ttctggagag aagtgttata
1741aatgtaatga atgtggaaaa gcctttgctc attcctcaac ccttattcaa catcaaacca
1801ctcacactgg agagaaatcc tatatatgta atatatgtgg gaaagccttc agccagagtg
1861caaatcttac tcaacatcat agaacacata ctggagagaa accatataaa tgcagtgtgt
1921gtgggaaagc attcagccag agtgtgcacc ttactcaaca tcagaggatt cataatggag
1981aaaaaccctt taaatgcaat atatgtggga aagcatatag acaaggcgca aatcttactc
2041agcatcaaag gattcatact ggagaaaaac cctataaatg taatgaatgt gggaaagctt
2101tcatttattc ctcatcactt aatcaacatc agagaactca tactggagag agaccctata
2161aatgtaatga atgtgataag gattttagcc agagaacatg ccttattcaa caccagagaa
2221ttcacacagg agagaaaccc tatgcatgtc gtatatgtgg taaaaccttc acccagagta
2281caaaccttat tcagcatcaa cgtgttcata caggtgccaa acatcgtaat ttgccaactt
2341tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
2401agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)