Construct: ORF ccsbBroad304_12564

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001311.1_s304c1, BRDN0000462021
Derived from:
ccsbBroadEn_12564
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NOX5 (79400)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12564
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79400 NOX5 NADPH oxidase 5 NM_001184780.2 98.3% 98.3% (many diffs)
2 human 79400 NOX5 NADPH oxidase 5 NM_001184779.2 97.4% 97.4% (many diffs)
3 human 79400 NOX5 NADPH oxidase 5 NM_024505.4 93.8% 93.8% (many diffs)
4 human 79400 NOX5 NADPH oxidase 5 NR_033672.2 25.2% (many diffs)
5 human 79400 NOX5 NADPH oxidase 5 NR_033671.3 25% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2226
ORF length:
2157
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gagtgccgag gaggatgcca ggtggctccg gtgggtgact cagcagttta
121agaccattgc aggagaagat ggggagatca gcctgcaaga attcaaagca gctctgcatg
181tgaaagagtc cttctttgca gagcgattct ttgccctatt tgactccgat agaagtggca
241ccatcaccct ccaggagctg caggaggcac tgaccctgct catccatggc agccccatgg
301acaaactcaa attcctcttc caggtgtatg acatcgatgg cagtggctcc attgacccgg
361atgagctgcg cactgtgctg cagtcgtgtc tgcgcgagag cgccatctcg ctgcctgacg
421agaagctgga ccagctgacg ctggcgctct tcgaatcggc cgacgcggac ggcaacgggg
481ccatcacctt cgaggagctc cgggacgagc tgcagcgctt ccccggagtc atggagaacc
541tgaccatcag cgctgcccac tggctgacgg cccccgcccc ccgcccacgc ccgcgccggc
601cgcgccagct gacccgcgcc tactggcaca accaccgcag ccagctgttc tgcctggcca
661cctatgcagg cctccacgtg ctgctcttcg ggctggcggc cagcgcgcac cgggacctcg
721gcgccagcgt catggtggcc aagggctgtg gccagtgcct caacttcgac tgcagcttca
781tcgcggtgct gatgctcaga cgctgcctca cctggctgcg ggccacgtgg ctggctcaag
841tcctaccact ggaccagaac atccagttcc accagcttat gggctacgtg gtagtggggc
901tgtccctcgt gcacactgtg gctcacactg tgaactttgt actccaggct caggcggagg
961ccagcccttt ccagttctgg gagctgctgc tcaccacgag gcctggcatt ggctgggtac
1021acggttcggc ctccccgaca ggtgtcgctc tgctgctgct gctcctcttc atgttcatct
1081gctccagttc ctgcatccgc aggagtggcc actttgaggt gttctattgg actcacctgt
1141cctacctcct cgtgtggctt ctgctcatct ttcatgggcc caacttctgg aagtggctgc
1201tggtgcctgg aatcttgttt ttcctggaga aggccatcgg actggcagtg tcccgcatgg
1261cagccgtgtg catcatggaa gtcaacctcc tcccctccaa ggtcactcat ctcctcatca
1321agcggccccc tttttttcac tatagacctg gtgactactt gtatctgaac atccccacca
1381ttgctcgcta tgagtggcac cccttcacca tcagcagtgc tcctgagcag aaagacacta
1441tctggctgca cattcggtcc caaggccagt ggacaaacag gctgtatgag tccttcaagg
1501catcagaccc actgggccgt ggttctaaga ggctgtcgag gagtgtgaca atgagaaaga
1561gtcaaaggtc gtccaagggc tctgagatac ttttggagaa acacaaattc tgtaacatca
1621agtgctacat cgatgggcct tatgggaccc ccacccgcag gatctttgcc tctgagcatg
1681ccgtgctcat cggggcaggc atcggcatca ccccctttgc ttccattctg cagagtatca
1741tgtacaggca ccagaaaaga aagcatactt gccccagctg ccagcactcc tggatcgaag
1801gtgtccaaga caacatgaag ctccataagg tggactttat ctggatcaac agagaccagc
1861ggtctttcga gtggtttgtg agcctgctga ctaaactgga gatggaccag gccgaggagg
1921ctcaatacgg ccgcttcctg gagctgcata tgtacatgac atctgcactg ggcaagaatg
1981acatgaaggc cattggcctg cagatggccc ttgacctcct ggccaacaag gagaagaaag
2041actccatcac ggggctgcag acgcgcaccc agcctgggcg gcctgactgg agcaaggtgt
2101tccagaaagt ggctgctgag aagaagggca aggtgcaggt cttcttctgt ggctccccag
2161ctctggccaa ggtgctgaag ggccattgtg agaagttcgg cttcagattt ttccaagaga
2221atttcttgcc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
2281gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
2341acctctggat ta

Download FASTA (ORF) (Full)

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