Construct: ORF ccsbBroad304_12775

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015853.1_s304c1, BRDN0000406904
Derived from:
ccsbBroadEn_12775
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FBXO30 (84085)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12775
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84085 FBXO30 F-box protein 30 NM_001348092.2 90.6% 90.6% 1_210del
2 human 84085 FBXO30 F-box protein 30 NM_032145.5 90.6% 90.6% 1_210del
3 human 84085 FBXO30 F-box protein 30 XM_011536177.3 90.6% 90.6% 1_210del
4 human 84085 FBXO30 F-box protein 30 XM_017011353.1 90.6% 90.6% 1_210del
5 mouse 71865 Fbxo30 F-box protein 30 NM_001168297.1 79.7% 79% (many diffs)
6 mouse 71865 Fbxo30 F-box protein 30 NM_027968.3 79.7% 79% (many diffs)
7 mouse 71865 Fbxo30 F-box protein 30 XM_006512859.3 79.7% 79% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2091
ORF length:
2025
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ccgaaataaa gttgctgaac atctagaaat gtgtcctgca agtgtggtgt
121gctgtactat ggaatggaat cgatggccag ttagttatgc agaccggaaa tcatatgaaa
181atctaagcag agatgtcgat gaagtggcac aattggatat ggccttggct cttcaagacc
241aaaggatgct cttagaatcc ctcaaagtag ccaccatgat gtcaaaagca actgataaag
301tatccaaacc tagagaacaa atctcagtta aatcaagtgt cccagaaata ccacatgcta
361atggtttagt gtctgttgat gaagaatctt atggtgcact ttatcaagct actgtagaaa
421caaccagaag tttggctgct gctttggata tcctgaatac tgctacaaga gacattggca
481tgttaaatac aagtgtccca aatgacatgg atgaacagca aaatgcgaga gaaagcttag
541aggatcaaaa cttgaaagac caagatcatc tttatgagga ggaaatagga gcagtaggtg
601gaattgacta caatgacaca aatcagaatg cccagtctga acaaaatggt tcaagtgatt
661tattatgtga cttgaataca agttcttatg acacttctgc tctttgtaat ggctttcctt
721tggaaaatat atgtacccag gtcatagacc agaatcagaa tttacatggt gattcaaaac
781aaagtaactt aacaaatgga gactgtgtgg catcatcaga tggcacttca aaaccttcca
841gctcacttgc ggtggcagca caacttaggg aaataatacc atccagtgct ttgcctaatg
901gcacagttca gcatatcctc atgccagatg atgaaggtga aggtgaattg tgttggaaaa
961aagtagactt aggggacgtg aagaatgtgg atgtcttatc tttcagtcat gctccttcat
1021tcaattttct ttctaattca tgttggtcta aaccaaagga agataaagca gtagatacat
1081cagatttgga agttgcagaa gatcctatgg gcctccaagg aatagatctg atcacagcag
1141cattgctttt ttgtctagga gattctccag gagggagggg tatatctgat agccgcatgg
1201ctgatattta tcacattgac gttgggactc agactttttc acttccatct gcaatattag
1261ctacaagtac aatggttggg gagatagctt cagcttcagc ttgtgatcat gccaatccac
1321agctttcaaa tccaagtccg tttcagacac ttgggctgga tttagtattg gaatgtgtcg
1381ctaggtacca acccaagcag cgttcaatgt ttacctttgt gtgtggacag ttatttagaa
1441ggaaagaatt ttcttcccac tttaagaatg tgcatggtga cattcatgct ggactcaatg
1501gctggatgga acagaggtgc cctttagctt actatggttg tacctattct cagcgtagat
1561tttgtccatc aatacaagga gcaaagatta tacatgaccg ccatttgagg tcatttggag
1621ttcagccatg tgtatctaca gtattagtgg agcctgctag aaactgtgtg ttgggattac
1681ataatgacca tctaagtagt cttccttttg aggtcctgca gcatattgca ggctttctcg
1741atggcttcag cttatgtcag ctctcatgtg tatccaagtt aatgagggat gtgtgtggca
1801gcctgcttca gtctcgtggc atggtcatac tgcagtgggg gaaaaggaag tatccagaag
1861gaaattcatc atggcagata aaagaaaagg tatggcgatt tagtactgca ttttgttctg
1921ttaatgaatg gaaatttgct gacatcctaa gcatggcaga ccacttgaag aaatgcagtt
1981acaatgttgt cgagaaacgg gaggaagcaa tccctttgcc atgtatgtgt gtgacacgag
2041aactcactaa agaaggacgt tcactacgct cagttttaaa acctgtactt tacccaactt
2101tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
2161agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)