Construct: ORF ccsbBroad304_12819

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017925.1_s304c1, BRDN0000404599
Derived from:
ccsbBroadEn_12819
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF333 (84449)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12819
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84449 ZNF333 zinc finger protein 333 NM_001300912.2 99.8% 99.6% 343T>C
2 human 84449 ZNF333 zinc finger protein 333 NM_001352244.2 80.9% 80.3% (many diffs)
3 human 84449 ZNF333 zinc finger protein 333 NM_032433.4 45.4% 44.9% (many diffs)
4 human 84449 ZNF333 zinc finger protein 333 XM_011528362.2 45.4% 44.9% (many diffs)
5 human 84449 ZNF333 zinc finger protein 333 XM_017027367.1 45.4% 44.9% (many diffs)
6 human 84449 ZNF333 zinc finger protein 333 NM_001352239.2 29% 28.5% (many diffs)
7 human 84449 ZNF333 zinc finger protein 333 NM_001352240.2 29% 28.5% (many diffs)
8 human 84449 ZNF333 zinc finger protein 333 XM_011528363.2 29% 28.5% (many diffs)
9 human 84449 ZNF333 zinc finger protein 333 XM_011528365.2 29% 28.5% (many diffs)
10 human 84449 ZNF333 zinc finger protein 333 XM_011528367.2 29% 28.5% (many diffs)
11 human 84449 ZNF333 zinc finger protein 333 XM_011528368.2 29% 28.5% (many diffs)
12 human 84449 ZNF333 zinc finger protein 333 XM_011528369.2 29% 28.5% (many diffs)
13 human 84449 ZNF333 zinc finger protein 333 XM_017027369.1 29% 28.5% (many diffs)
14 human 84449 ZNF333 zinc finger protein 333 XM_017027370.1 29% 28.5% (many diffs)
15 human 84449 ZNF333 zinc finger protein 333 NM_001352241.2 23.5% 23.1% (many diffs)
16 human 84449 ZNF333 zinc finger protein 333 XM_024451740.1 23.5% 23.1% (many diffs)
17 human 84449 ZNF333 zinc finger protein 333 XM_024451741.1 23.5% 23.1% (many diffs)
18 human 84449 ZNF333 zinc finger protein 333 XM_011528371.2 17% 16.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
975
ORF length:
909
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga atccgtcacc tttgaggatg tggccgtgga gttcatccag gagtgggcat
121tgctggacag cgcacggagg agcctgtgca aatacaggat gcttgaccag tgcaggaccc
181tggcctccag gggaactcca ccatgcaaac ccagttgtgt ctcccagctg gggcaaagag
241cagagccaaa ggcaacagaa cgagggattc tccgtgccac aggtgttgcc tgggaatctc
301aacttaaacc cgaagagttg ccttctatgc aggatctttt ggaagaagca tcctccaggg
361acatgcaaat ggggccgggg ctgttcctga ggatgcagct ggtgcccccc atagaagaga
421gggagacacc attgactcga gaggaccggc cagctctcca ggagccgcct tggtctctgg
481gatgcacggg actgaaggcc gctatgcaga ttcagagggt ggtgatacca gtgcctactc
541tgggccaccg caacccatgg gtggccaggg attctgctgt gcctgcacgt gaccctgcct
601ggcttcagga ggacaaagtg gaggaagaag ctatggctcc tgggctgcca accgcctgtt
661cacaggaacc agtcaccttt gcagatgtgg ctgtggtgtt caccccagaa gaatgggtgt
721ttctggactc tactcagagg agcctgtata gagatgtgat gctggagaac tacaggaacc
781tggcctctgt ggctgatcaa ctgtgcaaac ccaatgcgtt gtcttatttg gaagaaagag
841gagagcagtg gaccactgac aggggcgtcc tctcagacac ctgtgcagaa cctcagtgtc
901aaccccaaga ggcaattcct agccaagata cttttacaga gatcctgtcc attgatgtga
961aagggccacc caactaccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1021ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1081cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)

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