Construct: ORF ccsbBroad304_13195

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014172.1_s304c1, BRDN0000411853
Derived from:
ccsbBroadEn_13195
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PXDNL (137902)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13195
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 137902 PXDNL peroxidasin like XM_005251168.3 60.6% 58.6% (many diffs)
2 human 137902 PXDNL peroxidasin like XM_011517458.2 38.7% 37.5% (many diffs)
3 human 137902 PXDNL peroxidasin like XM_017013041.1 38.7% 37.5% (many diffs)
4 human 137902 PXDNL peroxidasin like NM_144651.5 35.1% 34.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1614
ORF length:
1545
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gctcatgcac tggggctggt ttctagagca cgacttggac cacacagtgc
121ctgcgctgag cacagcccgc ttctcggatg ggcggccgtg cagctccgtc tgcaccaacg
181accctccttg tttccccatg aacacccggc acgccgaccc ccggggcacc cacgcgccct
241gcatgctctt cgcgcgctcc agccccgcgt gtgccagcgg ccgtccctct gcgacggtgg
301attcagtcta tgcacgagag cagatcaacc agcaaacagc ctacatcgat ggctccaacg
361tttacgggag ctcggagcgg gaatcccagg ctctcagaga cccttcggtg cctcggggtc
421tcctgaagac aggctttcct tggcctccct ccggaaagcc cttattgccc ttttctacag
481gcccacccac cgagtgcgcg cgacaggagc aggagagccc ctgtttcctg gccggggacc
541accgggccaa cgagcatctg gctctggccg ccatgcacac cctgtggttc cgggaacaca
601acagggtggc cacggagctg tccgccctga acccccactg ggagggaaac acggtttacc
661aggaagccag gaagatcgtg ggcgcggagc tgcagcacat cacctacagc cactggctgc
721ctaaggtcct gggggaccct ggcactagga tgctgagggg ttaccgaggc tacaacccca
781acgtgaatgc aggcatcatt aactcttttg ctactgcagc ctttagattt ggccacacat
841taatcaatcc tattctttac cgactgaatg ccaccttagg tgaaatttcc gaaggccacc
901ttccgttcca taaagcgctc ttttcaccgt ccagaataat caaggaaggt gggatagacc
961cggttctccg ggggctgttt ggcgtggctg ctaaatggcg ggcaccctcc taccttctca
1021gtcctgagct gacccagagg ctcttctccg cggcttattc tgcggccgtg gattcggctg
1081ccaccatcat tcaaaggggt agagaccacg ggatcccacc atatgttgac ttcagagttt
1141tctgtaattt gacttcagtt aagaactttg aggatcttca aaatgaaatt aaagattcag
1201agattagaca aaaactgaga aagttgtacg gctctccagg tgacattgac ctctggcccg
1261cccttatggt tgaagacctg attcctggta caagagtggg accaacactt atgtgcctgt
1321ttgttaccca gtttcagcgg ctaagagatg gagataggtt ctggtatgaa aaccctggag
1381tatttacccc ggcacaactc actcagctga agcaggcgtc cctgagccgg gtgctttgtg
1441acaatggtga cagcattcag caagtgcagg ctgatgtctt tgtaaaggca gaatacccac
1501aggattacct gaactgcagc gagatcccga aggtggacct gcgagtgtgg caagactgct
1561gtgcagataa acaagctgga ggcacgcctg aggcaggcag ggtgtacaga tgtttgccaa
1621ctttcttgta caaagtggtt ggtaagccta tccctaaccc tctcctcggt ctcgattcta
1681cgtagtaatg agctagcgct aaccggtggc gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)