Construct: ORF ccsbBroad304_13423

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000598.1_s304c1, BRDN0000407457
Derived from:
ccsbBroadEn_13423
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NT5DC1 (221294)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13423
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 221294 NT5DC1 5'-nucleotidase domain cont... NM_152729.3 62.4% 62.4% 1_513del
2 human 221294 NT5DC1 5'-nucleotidase domain cont... XM_006715378.3 30.7% 30.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
918
ORF length:
852
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc agcttttaag gaaaactgtg gaatatattt tccagaaata aaaagagatc
121caggcagata tttacatagt tgtcctgaat ctgtgaaaaa atggcttcga cagctaaaga
181atgctgggaa aattcttctg ttaattacca gttctcacag tgattactgt agacttctct
241gcgaatatat tcttgggaat gattttacag acctttttga cattgtgatt acaaatgcat
301tgaagcctgg tttcttctcc cacttaccaa gtcagagacc tttccggaca ctcgagaatg
361atgaggagca ggaggcactg ccatctctgg ataaacctgg ctggtactcc caagggaacg
421ctgtccacct ctatgaactt ctgaagaaaa tgactggcaa acctgaaccc aaggttgttt
481attttggtga cagcatgcat tcagatattt tcccagctcg tcactatagt aattgggaga
541cagtcctcat cctggaagaa ctcagagggg atgaaggcac gaggagtcag aggcctgagg
601agtcagagcc tctagagaag aaaggaaaat atgagggacc aaaagcaaaa cctttaaata
661cttcatctaa aaaatggggc tcttttttta ttgattcagt tttgggactg gaaaatacag
721aagactcctt ggtttataca tggtcttgta agagaatcag tacttacagc actattgcaa
781ttccaagtat tgaagcaatc gcagaattac ctctggacta caaatttaca agattctctt
841caagcaattc aaaaacagct ggctactatc caaatcctcc actggtctta tcaagtgatg
901agacactgat atccaaatac ccaactttct tgtacaaagt ggttggtaag cctatcccta
961accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1021agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

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