Construct: ORF ccsbBroad304_13736

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001125.1_s304c1, BRDN0000460862
Derived from:
ccsbBroadEn_13736
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GXYLT2 (727936)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13736
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 727936 GXYLT2 glucoside xylosyltransferase 2 XM_011534068.2 100% 100%
2 human 727936 GXYLT2 glucoside xylosyltransferase 2 XM_011534067.3 87% 87% 1_141del
3 human 727936 GXYLT2 glucoside xylosyltransferase 2 NM_001080393.2 71.5% 71.5% 1_378del
4 human 727936 GXYLT2 glucoside xylosyltransferase 2 XM_017007123.2 64% 64% 1_141del;362_363ins252
5 human 727936 GXYLT2 glucoside xylosyltransferase 2 XM_017007124.2 63.7% 47.1% 1_141del;613_614ins124;837_838ins131
6 human 727936 GXYLT2 glucoside xylosyltransferase 2 NR_138564.2 28.8% 1_566del;1038_1039insAGAAC;1513_3271del
7 mouse 232313 Gxylt2 glucoside xylosyltransferase 2 NM_198612.2 62.3% 67.1% (many diffs)
8 mouse 232313 Gxylt2 glucoside xylosyltransferase 2 XM_006506007.4 53.3% 57.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1020
ORF length:
951
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatcat gctcaaatca gctgtgcttt ttagccacag gaagatccaa ttccacatct
121tcactgaaga ctctctgaag cccgagtttg ataagcagtt acgccagtgg cctgactcat
181atacaaagaa gtttgagcac agaatctacc ccatcacatt ttctgttgga aaccctcagg
241agtggaagaa attgttcaaa ccctgtgctg cccagagact ctttcttccg gtgattttaa
301aggatgtgga ctcacttctc tacgtggaca ccgatgtcct ctttctgaga cctgttgatg
361acatctggaa gcttctgagg ctgtttaatt ccacccagct tgcagccatg gcccctgagc
421acgaaatccc caagattggc tggtacagcc gctttgctag gcatcctttc tatggctctg
481caggagttaa ttcaggagtc atgttaatga atttaactcg gataagaagt acccagttca
541agaacagcat gattccaaca ggcctggctt gggaggacat gttgtaccct ctgtaccaga
601agtacaagaa tgccatcacg tggggagacc aggatttatt aaatattatt ttttatttca
661acccagagtg tctctatgta ttcccctgcc agtggaacta ccgtcccgat cactgcatgt
721acggaagcaa ctgcagagag gctgagcatg aaggtgtgtc tgttctgcat ggaaaccgag
781gcgtctacca tgacgataag caaccaacgt tcagagcact ctatgaagca atacgggatt
841ttccctttca agacaatctc tttcaatcca tgtattaccc ccttcagctg aagtttttgg
901agactgtgca cactttatgt ggacgaatcc cgcaagtttt tctgaagcaa attgagaaaa
961caatgaaaag ggcttatgag aaacacgtca tcatccatgt tggccccaac cagatgcact
1021tgccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1081attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1141ggatta

Download FASTA (ORF) (Full)