Construct: ORF ccsbBroad304_13902

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017515.1_s304c1, BRDN0000405062
Derived from:
ccsbBroadEn_13902
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MSN (4478)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13902
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4478 MSN moesin NM_002444.3 99.9% 99.4% 1724_1725insG
2 human 4478 MSN moesin XM_005262269.2 99.4% 98.6% 3_4insCC;10_15delAACCAAinsG;1727_1728insG
3 human 4478 MSN moesin XM_017029545.1 98% 97.5% 0_1ins33;1691_1692insG
4 human 4478 MSN moesin XM_017029546.1 98% 97.5% 0_1ins33;1691_1692insG
5 human 4478 MSN moesin XM_011530959.1 94.3% 93.4% (many diffs)
6 mouse 17698 Msn moesin NM_010833.2 92% 98% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1800
ORF length:
1734
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc caaaacgatc agtgtgcgtg tgaccaccat ggatgcagag ctggagtttg
121ccatccagcc caacaccacc gggaagcagc tatttgacca ggtggtgaaa actattggct
181tgagggaagt ttggttcttt ggtctgcagt accaggacac taaaggtttc tccacctggc
241tgaaactcaa taagaaggtg actgcccagg atgtgcggaa ggaaagcccc ctgctcttta
301agttccgtgc caagttctac cctgaggatg tgtccgagga attgattcag gacatcactc
361agcgcctgtt ctttctgcaa gtgaaagagg gcattctcaa tgatgatatt tactgcccgc
421ctgagaccgc tgtgctgctg gcctcgtatg ctgtccagtc taagtatggc gacttcaata
481aggaagtgca taagtctggc tacctggccg gagacaagtt gctcccgcag agagtcctgg
541aacagcacaa actcaacaag gaccagtggg aggagcggat ccaggtgtgg catgaggaac
601accgtggcat gctcagggag gatgctgtcc tggaatatct gaagattgct caagatctgg
661agatgtatgg tgtgaactac ttcagcatca agaacaagaa aggctcagag ctgtggctgg
721gggtggatgc cctgggtctc aacatctatg agcagaatga cagactaact cccaagatag
781gcttcccctg gagtgaaatc aggaacatct ctttcaatga taagaaattt gtcatcaagc
841ccattgacaa aaaagccccg gacttcgtct tctatgctcc ccggctgcgg attaacaagc
901ggatcttggc cttgtgcatg gggaaccatg aactatacat gcgccgtcgc aagcctgata
961ccattgaggt gcagcagatg aaggcacagg cccgggagga gaagcaccag aagcagatgg
1021agcgtgctat gctggaaaat gagaagaaga agcgtgaaat ggcagagaag gagaaagaga
1081agattgaacg ggagaaggag gagctgatgg agaggctgaa gcagatcgag gaacagacta
1141agaaggctca gcaagaactg gaagaacaga cccgtagggc tctggaactt gagcaggaac
1201ggaagcgtgc ccagagcgag gctgaaaagc tggccaagga gcgtcaagaa gctgaagagg
1261ccaaggaggc cttgctgcag gcctcccggg accagaaaaa gactcaggaa cagctggcct
1321tggaaatggc agagctgaca gctcgaatct cccagctgga gatggcccga cagaagaagg
1381agagtgaggc tgtggagtgg cagcagaagg cccagatggt acaggaagac ttggagaaga
1441cccgtgctga gctgaagact gccatgagta cacctcatgt ggcagagcct gctgagaatg
1501agcaggatga gcaggatgag aatggggcag aggctagtgc tgacctacgg gctgatgcta
1561tggccaagga ccgcagtgag gaggaacgta ccactgaggc agagaagaat gagcgtgtgc
1621agaagcacct gaaggccctc acttcggagc tggccaatgc cagagatgag tccaagaaga
1681ctgccaatga catgatccat gctgagaaca tgcgactggg ccgagacaaa tacaagaccc
1741tgcgccagat ccggcagggc aacaccaagc agcgcattga cgaatttgag gtctatgtac
1801ccaactttct tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat
1861tctacgtagt aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg
1921atta

Download FASTA (ORF) (Full)