Construct: ORF ccsbBroad304_14176

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015466.1_s304c1, BRDN0000400316
Derived from:
ccsbBroadEn_14176
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TASOR2 (54906)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14176
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54906 TASOR2 transcription activation su... NM_001321785.1 31.5% 31.4% 1_4824del;6968G>A;7043A>C
2 human 54906 TASOR2 transcription activation su... NM_001321783.1 30.4% 30.4% 1_5067del;7211G>A;7286A>C
3 human 54906 TASOR2 transcription activation su... NM_001321784.1 30.4% 30.4% 1_5067del;7211G>A;7286A>C
4 human 54906 TASOR2 transcription activation su... NM_017782.4 30.4% 30.4% 1_5067del;7211G>A;7286A>C
5 human 54906 TASOR2 transcription activation su... XM_005252475.4 30.4% 30.4% 1_5067del;7211G>A;7286A>C
6 human 54906 TASOR2 transcription activation su... XM_005252480.5 30.4% 30.4% 1_5067del;7211G>A;7286A>C
7 human 54906 TASOR2 transcription activation su... XM_005252481.5 30.4% 30.4% 1_5067del;7211G>A;7286A>C
8 human 54906 TASOR2 transcription activation su... XM_005252482.3 30.4% 30.4% 1_5067del;7211G>A;7286A>C
9 human 54906 TASOR2 transcription activation su... XM_011519525.3 30.4% 30.4% 1_5067del;7211G>A;7286A>C
10 human 54906 TASOR2 transcription activation su... XM_017016363.2 30.4% 30.4% 1_5067del;7211G>A;7286A>C
11 human 54906 TASOR2 transcription activation su... XM_017016365.2 30.4% 30.4% 1_5067del;7211G>A;7286A>C
12 human 54906 TASOR2 transcription activation su... XM_005252476.5 29.3% 29.3% 1_5340del;7484G>A;7559A>C
13 human 54906 TASOR2 transcription activation su... XM_017016364.2 29.2% 29.1% 1_5376del;7520G>A;7595A>C
14 human 54906 TASOR2 transcription activation su... XM_011519521.3 28.8% 28.7% 1_5478del;7622G>A;7697A>C
15 human 54906 TASOR2 transcription activation su... XM_011519522.3 28.8% 28.7% 1_5478del;7622G>A;7697A>C
16 human 54906 TASOR2 transcription activation su... XM_017016362.2 28.7% 28.6% 1_5514del;7658G>A;7733A>C
17 human 54906 TASOR2 transcription activation su... XM_011519520.3 28.3% 28.2% 1_5622del;7766G>A;7841A>C
18 human 54906 TASOR2 transcription activation su... XM_011519519.3 28% 28% 1_5682del;7826G>A;7901A>C
19 human 54906 TASOR2 transcription activation su... XM_017016361.1 28% 28% 1_5682del;7826G>A;7901A>C
20 human 54906 TASOR2 transcription activation su... XM_011519518.3 27.7% 27.7% 1_5772del;7916G>A;7991A>C
21 human 54906 TASOR2 transcription activation su... XM_005252474.4 27.7% 27.6% 1_5787del;7931G>A;8006A>C
22 human 54906 TASOR2 transcription activation su... XM_011519517.3 27.5% 27.4% 1_5850del;7994G>A;8069A>C
23 human 54906 TASOR2 transcription activation su... XM_011519515.3 27.2% 27.2% 1_5925del;8069G>A;8144A>C
24 human 54906 TASOR2 transcription activation su... XM_011519516.2 27.2% 27.2% 1_5925del;8069G>A;8144A>C
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2289
ORF length:
2223
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc cagtttgctt aagaatggtg agcctgaagc tgagttacat aaagaaacca
121caggtccagg cactgctggc cctcagtcca acaccacatc ttctctaaaa ggtgaacgca
181aagccatcca cacgctgcaa gatgtgtcaa catgtgaaac aaaggagcta ttgaatgtcg
241gggtttcctc cctttgtgct ggtccctacc aaaatacagc agacaccaag gaaaacctca
301gtaaagagcc tttggcctcc tttgtttcag aatcctttga tacttctgtt tgtggaatag
361ccacagagca cgtagaaatt gagaacagtg gggaggggct cagggctgag gctggttctg
421aaaccctagg cagagatgga gaggtcggtg tgaattccga catgcactat gaactctctg
481gagattctga tctagacctg cttggtgatt gtagaaatcc cagactggat ttggaggatt
541cttatacttt aagaggtagt tacaccagga aaaaagatgt tcccacagat ggctatgagt
601cgtcgttgaa cttccacaac aacaaccaag aggactgggg ctgctctagc tgggttccag
661gcatggagac gagcctccct cccgggcact ggactgctgc ggtaaagaaa gaagagaagt
721gtgtgccgcc ttacgtccaa atccgagatc tccacgggat cctcaggact tacgccaact
781tctctataac aaaagaactc aaagatacca tgagaacttc acacggcctg aggaggcacc
841cgagtttcag tgcaaactgt ggcctgccca gctcctggac aagcacttgg caggtggcag
901acgacctcac ccagaacact ttagacctgg agtatctgcg ttttgcacat aaactaaaac
961agaccataaa gaatggggat tctcagcatt ctgcctcctc tgccaatgtc tttccaaagg
1021agtcaccaac ccagatctcc attggtgctt tcccttcgac aaaaatctct gaggccccat
1081ttctgcatcc tgcacctagg agcagaagcc cccttctggt aacagttgtg gagtcagatc
1141ccagaccaca ggggcagccc aggagaggct acacagccag cagtctggac agctcttcct
1201cttggagaga gagatgtagt cataatagag atcttagaaa ttctcaaaga aatcacactg
1261tttcattcca cctcaacaaa ctgaaataca acagtactgt gaaggaatct cggaatgata
1321tttcacttat tctcaatgag tatgctgaat tcaacaaggt gatgaagaat agcaaccaat
1381tcattttcca agacaaagag ctaaatgatg tttctggaga agccactgct caagagatgt
1441atctgccttt cccaggacgg tcagcctcct atgaagacat aatcatagac gtgtgcacca
1501atttgcacgt caaactaaga agtgttgtga aagaggcttg taaaagtacc ttcctgttct
1561accttgtcga aacagaagac aaatcattct ttgtaagaac aaagaacctt ctgaggaaag
1621gaggccatac agaaattgaa cctcagcact tctgtcaagc tttccacaga gagaatgata
1681cactaatcat catcatcaga aatgaagata tatcatcaca tttgcatcag attccttctt
1741tgctgaagct gaagcatttc cccagtgtca tctttgctgg agtagacagc cctggagatg
1801ttcttgatca cacctaccaa gaactgtttc gtgcaggagg ctttgtgata tcagatgaca
1861agatactaga agctgtaaca ttagttcaac tgaaggaaat tatcaaaatc ctggaaaaac
1921taaatggaaa tggaagatgg aagtggttgc ttcactacag ggaaaataaa aagctaaaag
1981aagatgaaag agtggattca actgcacata agaagaacat aatgttgaag tcatttcaga
2041gtgcaaatat cattgaattg cttcattatc accagtgtga ctctcgatca tcaacaaaag
2101cagaaattct gaaatgtttg ctaaacctgc aaattcagca tattgatgcc aggtttgctg
2161tcctcctaac agacaagcct actatcccca gagaagtctt tgaaaataat ggaatccttg
2221ttacagatgt aaataacttt atagaaaaca tagaaaaaat agcagctcca tttaggagta
2281gctcttggtg cccaactttc ttgtacaaag tggttggtaa gcctatccct aaccctctcc
2341tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt aagtcgacaa
2401tcaacctctg gatta

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