Construct: ORF ccsbBroad304_14411

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012363.1_s304c1, BRDN0000402064
Derived from:
ccsbBroadEn_14411
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
C8orf37 (157657)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14411
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 157657 C8orf37 chromosome 8 open reading f... NM_177965.4 99.8% 36.2% 217delG
2 human 157657 C8orf37 chromosome 8 open reading f... NM_001363260.1 84.3% 42.8% 217delG;372_373ins96
3 mouse 67157 2610301B20Rik RIKEN cDNA 2610301B20 gene NM_026005.3 84.6% 26.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
315
ORF length:
246
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcggaggac ctggacgagc tcttggatga agtcgagtcc aagttttgca
121cacctgacct tctaagacgg ggtatggtcg agcagcccaa aggctgcggc ggcggcaccc
181acagtagcga ccggaaccaa gccaaggcga aagagacgct cagatcaaca gaaacattta
241aaaaagaaga tgatcttgac agtcttatta atgaaatact tgaaagccca acttggacaa
301aaaaccctct aaattaaaat ctaaatcttc aggtaacaca tctgtcagag cttccattga
361aggccttggt aaaagttgca gtccggtgta ccttggtgga agctctattc catgtgggat
421tggaacaaat atttcatgga gagcatgtga ccatctgcgt tgtatagcct gtgatttctt
481ggtagtcagc tatgatgact atatgtggga caaatcgtgt gattatctgt ttttcaggaa
541caacatgcca gaatttcaca aattaaaagc aaagttgata aagaagaaag gaacacgggc
601atatgcctgc cagtgtagct ggagaactat tgaagaagtg actgaccttc agacagatca
661tcagcttcgc tgggtttgtg gtaaacattt gccaactttc ttgtacaaag tggttggtaa
721gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta gcgctaaccg
781gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)