Construct: ORF ccsbBroad304_14493

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006337.1_s304c1, BRDN0000460885
Derived from:
ccsbBroadEn_14493
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
VGLL3 (389136)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14493
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 389136 VGLL3 vestigial like family member 3 NM_001320493.2 99.8% 99.6% 80C>T
2 human 389136 VGLL3 vestigial like family member 3 NM_016206.4 97% 96% (many diffs)
3 human 389136 VGLL3 vestigial like family member 3 XM_006713138.4 96.7% 95.7% (many diffs)
4 human 389136 VGLL3 vestigial like family member 3 NM_001320494.2 80.8% 79.7% (many diffs)
5 mouse 73569 Vgll3 vestigial like family member 3 XM_006523097.3 85.9% 84.8% (many diffs)
6 mouse 73569 Vgll3 vestigial like family member 3 NM_028572.1 85.6% 84.4% (many diffs)
7 mouse 73569 Vgll3 vestigial like family member 3 XM_006523098.2 72% 71.7% (many diffs)
8 mouse 73569 Vgll3 vestigial like family member 3 XM_006523099.3 70.9% 69.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1029
ORF length:
960
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gagttgtgcg gaggtgatgt atcaccccca gccttatgga gcgtcccagt
121atctgcccaa ccccatggca gcgacaatct gccccacagc ctactatcag ccggcgcccc
181aacctggcca gcagaagaag ttagcggtat tcagcaagat gcaggactct ctggaagtca
241cccttcccag caaacaagag gaggaggatg aggaggagga ggaggaggag aaagaccagc
301ctgccgagat ggagtacctt aactctcgct gtgtcctttt cacttatttc cagggagaca
361ttgggtcagt agtggatgaa cacttctcaa gagctttggg ccaagccatc accctccatc
421cagaatctgc catttcaaaa agcaagatgg ggctaacccc cctatggcga gacagctcag
481ctctctcaag ccagcggaat agtttcccaa cttccttttg gaccagctct taccagcccc
541cacctgcacc ttgtttgggg ggagttcatc ctgacttcca ggtcactgga ccccctggca
601ccttttctgc agctgatccc agtccttggc cgggacacaa cctgcatcag actggcccag
661cccctccccc tgctgtgtct gagtcctggc cttatccttt gacatctcag gtgagcccat
721cctacagcca tatgcatgac gtgtacatgc ggcaccacca ccctcatgcc cacatgcacc
781accgccaccg ccaccatcat caccatcacc accctcctgc tggctctgcc ctggatccat
841cctatgggcc tctgctgatg ccttcagtgc atgcggccag gattcctgct ccccagtgtg
901acatcacaaa gacagaacca actacagtca cctctgctac ctcagcatgg gctggagcct
961ttcatggaac agtagacata gtgcccagcg tgggattcga tacaggctgg agtgcaatgg
1021cgagatcttt gccaactttc ttgtacaaag tggttggtaa gcctatccct aaccctctcc
1081tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt aagtcgacaa
1141tcaacctctg gatta

Download FASTA (ORF) (Full)