Construct: ORF ccsbBroad304_14501

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017755.1_s304c1, BRDN0000460924
Derived from:
ccsbBroadEn_14501
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SRRD (402055)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14501
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 402055 SRRD SRR1 domain containing NM_001013694.3 97.4% 96.1% (many diffs)
2 human 402055 SRRD SRR1 domain containing XM_011530178.2 78.9% 76.2% (many diffs)
3 human 402055 SRRD SRR1 domain containing XM_017028799.2 64.3% 58.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1062
ORF length:
996
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc tgcggccgca gctgcggcgc tggaatcctg gcaggcggcg gctccgcgga
121agaggcgctc cgcggctcga cggccgcggc ggagggaggc ggcgccccgg gggagagagg
181cggcgccccg gggccccgag gcggagttag agtctgacag cggagtcgtg cttcgtcgca
241tctgggaggc tgagaaggac ctgtttatct ctgatttctg gagttcagca ctagaaacca
301tcaatagatg tctaacaaaa catctggaac aactgaagac ccctgtgggg actctttcag
361acatctttgg aaacctgcat cttgactcat tgccagagga gtcagatgtg gccactgatt
421ctatcccaag agagatcttg gtcacaggaa cctgccattt gaagtgtgtg tgttacggca
481ttgggaactt tgccacctgc atcgtagcta gaaaccagct aacgtttttg ctgcttttgt
541tggaaaagtg ccagattccc agaagtcact gttgggtata tgaccctctg tttagccaac
601ttgaaattga agtccttaac acccttggtg tgactgttct cagtgagaac gaggaaggga
661aacggagtat tcgcggggag cctaccatct tttacatgct ccattgtggg acggccttgt
721acaacaatct tttatggagt aactggtcag tagatgccct ttctaagatg gtcatcattg
781ggaacagttt caaaggactt gaggagaggt tgttggcaag gattctgcag aaaaattatc
841cctacattgc aaagatttta aaaggactgg aggagcttga gtttcctcag acttcacaat
901acatggacat atttaatgat acctctgtcc actggttccc tgtgcaaaag ctagaacagc
961tctccataga tatttgggag ttttgggaag aaccagatta tcaggactgt gaggaccttg
1021aaatcatcag gaacaagaga gaagatcctt ctgtactgac tgcccaactt tcttgtacaa
1081agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt agtaatgagc
1141tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)