Construct: ORF ccsbBroad304_14939

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006343.1_s304c1, BRDN0000406314
Derived from:
ccsbBroadEn_14939
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCNK6 (9424)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14939
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9424 KCNK6 potassium two pore domain c... NM_004823.3 100% 100%
2 human 9424 KCNK6 potassium two pore domain c... XM_024451788.1 57.1% 57.1% 0_1ins402
3 human 9424 KCNK6 potassium two pore domain c... XM_017027506.1 48.1% 34.2% (many diffs)
4 human 9424 KCNK6 potassium two pore domain c... XM_011527527.1 47.6% 34.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1005
ORF length:
939
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcg gaggggcgcg cttctggcgg gcgccttggc cgcgtacgcc gcgtacctgg
121tgctgggcgc gctgttggtg gcgcggctgg aggggccgca cgaagccagg ctccgagccg
181agctggagac gctgcgggcg cagctgcttc agcgcagccc gtgtgtggct gcccccgccc
241tggacgcctt cgtggagcga gtgctggcgg ccggacggct ggggcgggtc gtgcttgcta
301acgcttcggg gtccgccaac gcctcggacc ccgcctggga cttcgcctct gctctcttct
361tcgccagcac gctgatcacc accgtgggct atgggtacac aacgccactg actgatgcgg
421gcaaggcctt ctccatcgcc tttgcgctcc tgggcgtgcc gaccaccatg ctgctgctga
481ccgcctcagc ccagcgcctg tcactgctgc tgactcacgt gcccctgtct tggctgagca
541tgcgttgggg ctgggacccc cggcgggcgg cctgctggca cttggtggcc ctgttggggg
601tcgtagtgac cgtctgcttt ctggtgccgg ctgtgatctt tgcccacctc gaggaggcct
661ggagcttctt ggatgccttc tacttctgct ttatctctct gtccaccatc ggcctgggcg
721actacgtgcc cggggaggcc cctggccagc cctaccgggc cctctacaag gtgctggtca
781cagtctacct cttcctgggc ctggtggcca tggtgctggt gctgcagacc ttccgccacg
841tgtccgacct ccacggcctc acggagctca tcctgctgcc ccctccgtgc cctgccagtt
901tcaatgcgga tgaggacgat cgggtggaca tcctgggccc ccagccggag tcgcaccagc
961aactctctgc cagctcccac accgactacg cttccatccc caggtaccca actttcttgt
1021acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1081gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)