Construct: ORF ccsbBroad304_15058

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014455.1_s304c1, BRDN0000401872
Derived from:
ccsbBroadEn_15058
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDON (50937)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15058
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 50937 CDON cell adhesion associated, o... NM_016952.4 99.8% 99.6% (many diffs)
2 human 50937 CDON cell adhesion associated, o... XM_011542866.3 99.8% 99.6% (many diffs)
3 human 50937 CDON cell adhesion associated, o... NM_001243597.1 98% 97.9% (many diffs)
4 human 50937 CDON cell adhesion associated, o... XM_011542862.3 98% 97.9% (many diffs)
5 human 50937 CDON cell adhesion associated, o... XM_011542863.2 98% 97.9% (many diffs)
6 human 50937 CDON cell adhesion associated, o... XM_011542864.2 98% 97.9% (many diffs)
7 human 50937 CDON cell adhesion associated, o... XM_011542865.2 98% 97.9% (many diffs)
8 human 50937 CDON cell adhesion associated, o... XM_017017873.1 98% 97.9% (many diffs)
9 human 50937 CDON cell adhesion associated, o... XR_001747899.2 45.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3861
ORF length:
3792
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcatccggat cttggaccct tatgtacact gctgtatgtt actcttacaa
121ttctgtgctc ttctgtgagt tcagacttgg caccttattt tacttctgag ccgctctctg
181ctgtccagaa acttggtgga cctgtagtac tgcattgttc tgctcaacct gtgaccactc
241gtatctcatg gctgcataac ggaaaaacat tggatggaaa cctggaacat attaagattc
301atcaggggac tctgacaatt ctttctctca actcctctct tttgggttac taccagtgcc
361ttgccaacaa tagcatcggt gccattgtga gtggccctgc gacagtatct gtggcagttc
421ttggtgattt tggttcatcc acaaagcatg ttattacagc agaagaaaaa agtgctggtt
481tcattggctg cagggtaccg gagagtaacc ccaaagctga ggtgcgctat aaaatccggg
541gaaaatggct gaaacattcc acagagaatt acttaatcct tccatcagga aatcttcaga
601ttttgaatgt atccttagag gacaagggat catacaaatg tgcagcttat aatcctgtca
661cacatcaatt aaaagttgaa cctattggcc gaaagctcct tgtgagtcgt ccttcttcag
721atgatgttca cattcttcac cccacccatt cacaggcatt agctgttctt tctcgtagcc
781ctgtaacctt ggagtgtgtg gtgagtgggg tcccggctcc tcaagtgtat tggctaaagg
841acgggcagga cattgcacca ggaagcaact ggagaaggtt gtattctcat cttgccactg
901atagcgttga cccggcggac tccggaaact attcctgcat ggcgggaaac aagtctggag
961atgtaaaata tgtgacttac atggttaatg tacttgaaca tgcttccatt tctaaaggac
1021tacaggatca gatagtgtct ctgggtgcca cagtacactt tacctgcgac gttcatggga
1081acccagcccc caactgtacc tggtttcaca atgcacagcc tattcatcct tctgcacgac
1141atctaactgc aggaaacgga ctgaaaatca gtggggttac tgtggaagat gttgggatgt
1201atcagtgtgt agcagataat gggattggat ttatgcactc tactggaaga cttgaaattg
1261aaaatgacgg tggattcaag ccagttataa ttacggcacc agtaagtgca aaggttgcag
1321acggagactt tgttactctg tcctgcaatg ccagtgggct gccggttccg gtcattcgtt
1381ggtatgacag ccatggattg ataaccagcc atccatctca agtcctgaga tcgaaatccc
1441gaaaatcaca gttatcaaga cctgagggct tgaacctgga gcctgtgtac ttcgtcctgt
1501cccaagctgg tgcaagctct ctccatattc aggctgtgac tcaggaacat gcggggaaat
1561acatctgcga agctgcaaat gaacatggta ccacacaggc agaagcatct ctcatggttg
1621ttccttttga aacaaataca aaagcagaga cagtcacact tcctgatgct gctcagaatg
1681atgacagaag taagagagat ggttcagaaa ctgggttact gagctcattt ccggtgaagg
1741tccatcccag tgcagtggaa tcagcaccag agaaaaacgc cagcggcatc tctgttcctg
1801atgcccccat catactgagc cccccacaga cccacacacc agacacgtac aacctggtgt
1861ggagggcagg caaggatggt gggctgccca tcaatgctta ctttgtgaag tatcgaaagc
1921tggatgatgg ggttggcatg ctgggaagct ggcacacggt tcgagtccca ggaagtgaaa
1981atgagctcca tttagctgag ctggagccat ctagtcttta tgaagtcttg atggtagcaa
2041gaagcgcagc aggtgaaggc caacctgcca tgcttacctt ccgaaccagc aaagaaaaaa
2101cagcgtcatc aaaaaacacc caggcatcct ctccacccgt gggcatccct aagtatcccg
2161ttgtttcaga ggctgcaaac aacaattttg gagtggtact tacagattcc tctaggcaca
2221gtggagttcc agaggcacca gatcggccta ccatctccac tgcatcagag acatcagtct
2281atgtcacttg gattcctcgg gcaaacgggg gttctccaat cactgccttc aaagtcgaat
2341ataaacggat gaggaccagc aattggctgg tggcagctga agacatccct ccttccaaac
2401tttcagtgga agttcgtagt ttagaaccag gttcaacata caaatttagg gtcattgcca
2461tcaaccatta tggtgagagt tttcggagtt cagcatctcg tccttatcaa gtggttgggt
2521tccccaatcg cttttccagc cgtccaataa ctggacctca cattgcatac acagaggctg
2581tcagcgatac tcagatcatg ctaaagtgga cgtacattcc atcaagtaac aataacactc
2641ccattcaagg attttatatc tattaccgac caacagatag tgacaatgac agtgattaca
2701agagggatgt tgtagaaggt tcaaagcagt ggcacatgat tggccacctg cagccagaaa
2761cctcctatga cattaaaatg caatgcttca atgaaggagg agaaagtgaa tttagcaatg
2821tgatgatctg cgagactaaa gtgaaacgtg ttcctggagc ttctgaatat cctgtcaaag
2881acttgagtac ccctccaaat tctttgggaa gtggaggaaa tgtggggcct gcaaccagcc
2941ctgccagaag cagtgacatg ttatatctga tcgttggctg tgtgctgggc gtcatggtcc
3001tcattctgat ggttttcatt gcaatgtgcc tgtggaagaa tcgccagcag aataccatac
3061aaaaatatga cccaccagga tatctctacc aaggatcaga tatgaacggg cagatggtgg
3121actacaccac tctctcagga gcaagtcaga taaatggaaa tgttcacgga ggcttcctaa
3181ccaatggcgg tctcagcagt ggctattccc accttcacca taaggtcccc aatgcagtca
3241atggaattgt gaatgggagc ctaaatggag ggctttactc cgggcacagc aactctctaa
3301ccaggacaca cgtggatttt gaacatcctc atcatctagt gaatggtggt ggaatgtaca
3361cggccgtgcc tcagattgac cctctggagt gtgttaactg ccgaaattgt cgaaacaaca
3421ataggtgttt caccaaaacc aacagcactt tcagcagcag cccccctcct gtggtccctg
3481tggtagcacc ttatcctcag gatggtttgg aaatgaagcc cctcagtcac gtgaaggtgc
3541ctgtatgcct gacttccgca gtccctgatt gtggccagtt gccggaggag agcgtcaagg
3601acaatgtgga accagtccct actcagcgta cctgctgtca ggacattgta aatgacgtca
3661gctctgatgg ctcagaagat ccagcagagt tcagcagagg agacagctgt gcccattcag
3721aaacagagaa caacattgta agttggaatg ctcttatttt gccacctgtc cccgagggct
3781gtgctgagaa gacaatgtgg tctccacctg gcattccttt agacagcccg acagaggttc
3841agcagcagcc ccgggaaacc ttgccaactt tcttgtacaa agtggttggt aagcctatcc
3901ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
3961ttaagtcgac aatcaacctc tggatta

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