Construct: ORF ccsbBroad304_15061

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006250.1_s304c1, BRDN0000459604
Derived from:
ccsbBroadEn_15061
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
VRK3 (51231)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15061
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51231 VRK3 VRK serine/threonine kinase 3 NM_001308420.2 100% 100%
2 human 51231 VRK3 VRK serine/threonine kinase 3 NM_016440.4 86.6% 84.9% (many diffs)
3 human 51231 VRK3 VRK serine/threonine kinase 3 XM_005258971.4 86.6% 84.9% (many diffs)
4 human 51231 VRK3 VRK serine/threonine kinase 3 XM_006723237.3 86.6% 84.9% (many diffs)
5 human 51231 VRK3 VRK serine/threonine kinase 3 NM_001025778.1 76% 74.5% (many diffs)
6 human 51231 VRK3 VRK serine/threonine kinase 3 XM_005258972.4 76% 74.5% (many diffs)
7 human 51231 VRK3 VRK serine/threonine kinase 3 XM_006723238.4 76% 74.5% (many diffs)
8 human 51231 VRK3 VRK serine/threonine kinase 3 XR_001753695.2 55.8% 1_91del;1328_2215del
9 human 51231 VRK3 VRK serine/threonine kinase 3 XR_001753696.1 53.6% 1_181del;1418_2305del
10 human 51231 VRK3 VRK serine/threonine kinase 3 XR_001753698.2 52.7% 1_91del;702_703ins67;1261_2148del
11 human 51231 VRK3 VRK serine/threonine kinase 3 XR_001753697.2 45.6% 1_254del;390_391ins150;1341_2228del
12 human 51231 VRK3 VRK serine/threonine kinase 3 XR_002958320.1 40.9% 1_91del;1328_3019del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1302
ORF length:
1236
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat ctccttctgt ccagactgtg gcaaaagtat ccaagcggca ttcaaattct
121gcccctactg tggaaattct ttgcctgtag aggagcatgt agggtcccag acctttgtca
181atccacatgt gtcatccttc caaggctcaa agagagggct gaactccagt tttgaaacct
241ctcctaagaa agtgaaatgg tccagcaccg tcacctctcc ccgattatcc ctcttctcag
301atggtgacag ttctgagtct gaagatactc tgagttcctc tgagagatcc aaaggctccg
361ggagcagacc cccaaccccc aaaagcagcc ctcagaagac caggaagagc cctcaggtga
421ccaggggtag ccctcagaag accagctgta gccctcagaa gaccaggcag agccctcaga
481cgctgaagcg gagccgagtg accacctcac ttgaagcttt gcccacaggg acagtgctga
541cagacaagag tgggcgacag tggaagctga agtccttcca gaccagggac aaccagggca
601ttctctatga agctgcaccc acctccaccc tcacctgtga ctcaggacca cagaagcaaa
661agttctcact caaactggat gccaaggatg ggcgcttgtt caatgagcag aacttcttcc
721agcgggccgc caagcctctg caagtcaaca agtggaagaa gctgtactcg accccactgc
781tggccatccc tacctgcatg ggtttcggtg ttcaccagga caaatacagg ttcttggtgt
841tacccagcct ggggaggagc cttcagtcgg ccctggatgt cagcccaaag catgtgctgt
901cagagaggtc tgtgctgcag gtggcctgcc ggctgctgga tgccctggag ttcctccatg
961agaatgagta tgttcatgga aatgtgacag ctgaaaatat ctttgtggat ccagaggacc
1021agagtcaggt gactttggca ggctatggct tcgccttccg ctattgccca agtggcaaac
1081acgtggccta cgtggaaggc agcaggagcc ctcacgaggg ggaccttgag ttcattagca
1141tggacctgca caagggatgc gggccctccc gccgcagcga cctccagagc ctgggctact
1201gcatgctgaa gtggctctac gggtttctgc catggacaaa ttgccttccc aacactgagg
1261acatcatgaa gcaaaaacag aagttgcctt gggattcatt ttacccaact ttcttgtaca
1321aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1381ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)