Construct: ORF ccsbBroad304_15151

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018301.1_s304c1, BRDN0000404866
Derived from:
ccsbBroadEn_15151
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MICALL2 (79778)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15151
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79778 MICALL2 MICAL like 2 NM_182924.4 99.7% 99.6% (many diffs)
2 human 79778 MICALL2 MICAL like 2 XR_926947.1 85.2% (many diffs)
3 human 79778 MICALL2 MICAL like 2 XR_001744875.1 84.2% (many diffs)
4 human 79778 MICALL2 MICAL like 2 XM_011515520.3 84.1% 82.8% (many diffs)
5 human 79778 MICALL2 MICAL like 2 XM_011515522.3 82.8% 82.3% (many diffs)
6 human 79778 MICALL2 MICAL like 2 XR_002956487.1 80.6% (many diffs)
7 human 79778 MICALL2 MICAL like 2 XM_024446932.1 76.4% 75% (many diffs)
8 human 79778 MICALL2 MICAL like 2 XM_011515524.2 30.9% 29.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2778
ORF length:
2712
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggccatcagg gcgctgcaac agtggtgccg gcagcagtgc gagggctacc
121gcgacgtgaa tatctgcaac atgaccacgt cgttccgcga cggcctggct ttctgcgcca
181tcctgcaccg ccaccggccc gacctcataa acttcagtgc tctcaagaag gaaaatattt
241atgaaaacaa taaactggcc ttccgcgtgg ccgaggagca cttgggcatc ccagccttgc
301tggatgccga ggacatggtg gccttgaagg tgcctgaccg gctgagcatc ttgacctacg
361tgtcccagta ttacaactac ttccacggcc gctcccccat tgggggcatg gcaggcgtga
421agagggcctc ggaggactct gaggaggagc cgtcagggaa gaaggctcca gtccaggcgg
481ccaagctgcc ctcgcccgcc ccagcccgga agcctccact atctccagcc cagacaaacc
541ctgtggtcca gaggaggaat gagggtgcag ggggcccgcc ccccaagact gaccaggcat
601tggcgggcag cttggtcagc agcacctgcg gggtctgcgg caagcacgtg cacctggtac
661agcggcacct ggccgacggg aggctttacc accggagctg cttcaggtgt aagcagtgct
721cctgcacgct gcactcgggg gcctacaagg ccacaggaga gccgggcacc ttcgtctgca
781ccagccacct ccccgcagcc gcctctgcaa gccccaagtt gacgggtctg gtcccccgac
841agccaggggc catgggtgtg gattccagga cctcctgttc cccacagaag gcccaggagg
901caaacaaggc cagaccgtcg gcctgggagc ctgctgcggg caactcgcct gccagggctt
961ccgttccagc tgcacccaac cctgcagcca ccagcgccac gtccgtccac gtgaggagcc
1021cagccaggcc ctctgagagc cgcctggccc ccactcccac ggaggggaaa gtccgccctc
1081gtgtgaccaa tagctccccg atgggctggt cgtcagctgc cccgtgcaca gcagcggctg
1141cctcccatcc cgccgtgccc ccgagtgccc cagaccctcg cccggccaca ccccagggcg
1201ggggagcccc ccgagtggca gctcctcaaa ccacactcag ttcaagctcc acatctgcag
1261ccacggtgga ccccccagcc tggaccccgt ccgcctccag gacccagcag gcccggaata
1321agtttttcca aacatcagca gtgccccccg gcaccagcct ttctggcaga ggtcccaccc
1381cgtcacttgt tctatccaag gacagcagca aggagcaggc gcggaacttc ctcaagcagc
1441ccctcccagc gctggaagag gctggcgctc cggcgcctgg caggccctcc ccagccactg
1501ccgctgttcc cagttctcag cccaaaactg aagcaccaca agcaagtccc ttagccaagc
1561cgttacagtc ctcgtctccc cgggtgcttg gcctcccttc gaggatggaa ccgccagccc
1621cgctgagcac gagcagtacc tctcaggcat ccgcgttgcc cccggcaggc aggaggaact
1681tggctgaatc ctcaggggtc ggcagggtgg gtgctggctc caggccgaag ccagaggccc
1741cgatggcaaa gggtaaaagc accaccttaa cgcaggacat gagcaccagc ctccaggaag
1801gccaggagga cgggccggca ggatggagag cgaatctgaa gcccgtggac aggagaagcc
1861cagctgagag gactctgaag cccaaggaac cacgggccct ggcagagccg agggcggggg
1921aggcccccag gaaggtctca ggcagctttg ctgggagtgt ccacatcacc ctgacccccg
1981tgaggcctga caggacccca cgcccagcca gcccaggacc cagcctccca gccaggtccc
2041cctccccacc ccgccgcagg agactggccg tccctgccag cctcgacgtt tgtgacaact
2101ggcttcggcc ggagccccct ggccaggaag cccgagtgca gagctggaag gaggaggaga
2161agaaacctca ccttcagggc aaaccaggga gacccttgtc cccggccaat gtccctgctc
2221tgcctggcga gacggtgacc tccccagtca ggctgcaccc cgactacctc tccccggagg
2281agatacagag gcagctgcag gacatcgaga ggcggctgga cgccctggag ctccgcggcg
2341tggagctgga gaagcgactg cgggcggccg agggagatga cgctgaggat agcctcatgg
2401tggactggtt ctggctcatt cacgagaagc agcttctgct gagacaggag tcagagctga
2461tgtacaagtc caaggcccag cgtctggagg agcagcagct ggacatcgag ggcgagctgc
2521gccggctcat ggccaagccc gaggctctga agtcactgca ggagcggcgg cgggagcagg
2581agctgctgga gcagtacgtg agcaccgtga acgaccgcag tgacatcgtg gactcgctgg
2641acgaggaccg gctccgggaa caagaggagg atcagatgct gcgggacatg attgagaagc
2701tgggcctcca gaggaagaag tccaagttcc gcttgtccaa gatctggtca ccaaaaagct
2761caagcagccc ctcccagtac ccaactttct tgtacaaagt ggttggtaag cctatcccta
2821accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
2881agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)