Construct: ORF ccsbBroad304_16070

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000807.1_s304c1, BRDN0000401550
Derived from:
ccsbBroadEn_16070
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC114 (93233)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_16070
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93233 CCDC114 coiled-coil domain containi... NM_144577.4 69% 69.1% 1_621del;807C>T;1908T>C
2 human 93233 CCDC114 coiled-coil domain containi... NM_001364171.2 65.3% 65.4% 1_732del;918C>T;2019T>C
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1458
ORF length:
1389
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggaggcgcag gtcctgcagc ggcagatctt gcacctggag cagctgcacc
121acttcctcaa gctcaagaac aacgaccggc agccggatcc cgatgtcctg gagaagcgtg
181aaaagcaggc cggggaggtg gccgagggcg tctggaagac ctcccaggag aggctggtgc
241tttgctacga ggatgccctg aataaactgt cccagctgat gggggagagt gaccctgacc
301tgttggtgca gaagtatctg gagatcgagg agcgcaactt tgctgagttc aacttcatca
361acgagcagaa cttggagctg gagcatgtgc aggaagagat caaggagatg caggaggctt
421tggtgagcgc acgtgccagc aaggatgacc agcatttgct gcaggagcag cagcagaagg
481tgttgcagca gcgcatggac aaggtgcact cggaggctga gcgccttgag gcccgcttcc
541aggatgtgcg gggacagctg gagaagctca aggctgatat ccagctcctc ttcaccaagg
601cccattgcga cagcagcatg atcgatgacc tccttggggt caagaccagc atgggagacc
661gggacatggg cctcttcctg agcctcattg agaagcggct ggtggagctc ctgacagtgc
721aggccttcct acatgcccag agcttcacct ccctggccga cgctgccctc ctagtgctgg
781gccagagcct ggaggacctt ccgaagaaga tggccccact tcagccccct gacactctag
841aagacccccc gggttttgag gccagcgatg actaccccat gagcagggag gagctgctga
901gccaagtgga gaagctggtg gagctccagg agcaggcgga ggcgcagcgc cagaaggacc
961tggccgccgc cgccgcgaag ctggacggca ccctgagcgt ggacctggcc agcacccaga
1021gggccggctc cagtaccgtc ctggtgccca ccaggcaccc ccatgccatc cccgggtcca
1081ttttgagcca caagactagc agagaccgtg gctctcttgg ccacgtcact tttggcggcc
1141tcagctccag cactgggcat ttgcccagcc acatcacgca cggtgacccc aacactggcc
1201acgtgacctt cggctccacc agtgcctcga gtgggggcca cgtgaccttc agacccgtca
1261gcgccagcag ctacctgggc tccactggat acgtggggtc cagcaggggc ggagaaaaca
1321cagagggtgg tgtggagagc ggaggcacag cgtccgattc gagcggaggc ctcgggtcca
1381gcagagacca cgtctccagc accggccctg cctccagcac tggcccgggc tcctccacca
1441gcaaagactc ccggggctnn ccaactttct tgtacaaagt ggttggtaag cctatcccta
1501accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1561agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

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