Construct: ORF ccsbBroadEn_00145

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009233.1_s300c1, BRDN0000393844
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BACH1 (571)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 571 BACH1 BTB domain and CNC homolog 1 NM_001186.4 100% 100%
2 human 571 BACH1 BTB domain and CNC homolog 1 NM_206866.3 100% 100%
3 human 571 BACH1 BTB domain and CNC homolog 1 NR_027655.2 72.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2274
ORF length:
2208
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC TCTGAGTGAG AACTCGGTTT TTGCCTATGA ATCTTCTGTG CATAGCACCA
121ATGTTTTACT CAGCCTTAAT GACCAGCGGA AGAAAGATGT GCTGTGCGAT GTCACCATCT
181TTGTGGAGGG ACAGCGGTTC CGCGCTCACC GGTCCGTGCT GGCGGCATGC AGCAGTTACT
241TCCACTCAAG AATCGTAGGC CAGGCTGATG GAGAGCTGAA CATTACTCTT CCAGAAGAGG
301TGACAGTTAA AGGATTTGAA CCTTTAATTC AGTTTGCCTA CACTGCTAAA CTGATTTTAA
361GTAAAGAGAA TGTGGATGAA GTGTGCAAAT GTGTGGAGTT TTTAAGTGTA CATAATATTG
421AGGAATCCTG CTTTCAGTTT CTGAAATTTA AGTTTTTGGA CTCCACTGCA GACCAGCAAG
481AATGCCCAAG AAAAAAATGC TTTTCATCAC ACTGTCAGAA AACAGACCTT AAACTTTCAC
541TTTTGGACCA GAGGGATCTA GAAACTGATG AAGTGGAGGA ATTTCTGGAA AATAAAAATG
601TTCAGACTCC TCAGTGTAAA CTCCGCAGGT ATCAAGGAAA TGCAAAAGCC TCACCTCCTC
661TACAAGACAG TGCCAGTCAG ACATATGAGT CCATGTGCTT AGAGAAGGAT GCTGCTCTGG
721CCTTGCCTTC TTTATGCCCC AAATACAGAA AATTCCAAAA AGCATTTGGA ACTGACAGAG
781TCCGTACTGG GGAATCTAGT GTCAAAGACA TTCATGCTTC TGTTCAGCCA AATGAAAGGT
841CTGAAAATGA ATGCCTGGGA GGAGTCCCGG AGTGTAGAGA TTTGCAGGTG ATGTTAAAAT
901GTGACGAAAG TAAATTAGCA ATGGAACCTG AAGAAACGAA GAAAGATCCT GCTTCTCAGT
961GCCCAACTGA AAAATCAGAA GTGACTCCTT TCCCCCACAA TTCTTCCATA GACCCTCATG
1021GACTTTATTC TTTGTCTCTT TTACACACAT ATGACCAATA TGGTGACTTG AATTTTGCTG
1081GTATGCAAAA CACAACAGTG TTAACAGAAA AGCCTTTGTC AGGTACAGAC GTCCAAGAAA
1141AAACATTTGG TGAAAGTCAG GATTTACCTT TGAAATCCGA CTTGGGCACC AGGGAAGATA
1201GTAGTGTTGC ATCTAGTGAT AGGAGTAGTG TGGAGCGAGA AGTGGCAGAA CACCTAGCAA
1261AAGGCTTCTG GAGTGACATT TGCAGCACGG ACACTCCTTG CCAAATGCAG TTATCACCTG
1321CTGTGGCCAA AGATGGCTCA GAACAGATCT CACAGAAACG GTCTGAGTGT CCGTGGTTAG
1381GTATCAGGAT TAGTGAGAGC CCAGAACCAG GTCAAAGGAC TTTCACAACA TTAAGTTCTG
1441TCAACTGCCC TTTTATAAGT ACTCTGAGTA CTGAAGGCTG TTCAAGCAAT TTGGAAATTG
1501GAAACGATGA TTATGTTTCA GAACCCCAGC AAGAACCTTG CCCATATGCT TGTGTCATTA
1561GCTTGGGAGA CGACTCTGAG ACGGACACCG AAGGAGACAG TGAATCCTGT TCAGCCAGAG
1621AACAAGAATG TGAGGTAAAA CTGCCATTCA ATGCACAACG GATAATTTCA CTGTCTCGAA
1681ATGATTTTCA GTCCTTGTTG AAAATGCACA AGCTTACTCC AGAACAGCTG GATTGTATCC
1741ATGATATTCG AAGAAGAAGT AAAAACAGAA TTGCTGCACA GCGCTGTCGC AAGAGAAAAC
1801TTGACTGTAT ACAGAATCTT GAATCAGAAA TTGAGAAGCT GCAAAGTGAA AAGGAGAGCT
1861TGTTGAAGGA AAGAGATCAC ATTTTGTCAA CTCTGGGTGA GACAAAGCAG AACCTAACTG
1921GACTTTGCCA GAAAGTTTGT AAAGAAGCAG CTCTGAGTCA AGAACAAATA CAGATACTCG
1981CCAAGTACTC AGCTGCAGAT TGCCCACTTT CATTTTTAAT TTCTGAAAAA GATAAAAGTA
2041CTCCTGATGG TGAACTGGCG TTACCATCAA TTTTCAGTTT ATCTGACCGG CCTCCAGCAG
2101TGCTGCCTCC CTGTGCCAGA GGAAACAGTG AGCCTGGCTA CGCGCGAGGG CAGGAGTCCC
2161AGCAGATGTC CACAGCCACC TCTGAGCAAG CTGGGCCTGC GGAACAGTGT CGTCAGAGTG
2221GTGGGATCTC AGATTTCTGT CAGCAGATGA CTGATAAATG TACTACTGAT GAGTACCCAA
2281CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)

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