Construct: ORF ccsbBroadEn_00294

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018538.1_s300c1, BRDN0000392132
DNA Barcode:
None
Epitope Tag:
None
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
CETN3 (1070)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1070 CETN3 centrin 3 NM_004365.3 100% 100%
2 human 1070 CETN3 centrin 3 NM_001297765.1 87.4% 87.4% 461_532del
3 human 1070 CETN3 centrin 3 NM_001297768.1 85.1% 80% (many diffs)
4 mouse 12626 Cetn3 centrin 3 NM_007684.3 89% 98.8% (many diffs)
5 mouse 12626 Cetn3 centrin 3 XM_006517074.3 76.5% 83% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
567
ORF length:
501
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TTTAGCTCTG AGAAGTGAGC TTGTAGTGGA CAAAACAAAG AGGAAAAAAA
121GAAGAGAACT GTCTGAGGAA CAGAAACAAG AAATTAAAGA TGCTTTTGAA CTATTTGATA
181CAGACAAAGA TGAAGCAATA GATTATCATG AATTAAAGGT GGCAATGAGA GCCTTGGGGT
241TTGATGTAAA AAAAGCTGAT GTACTGAAGA TTCTTAAAGA TTATGACAGA GAAGCCACAG
301GGAAAATCAC CTTTGAAGAT TTTAATGAAG TTGTGACAGA CTGGATATTG GAAAGAGATC
361CCCATGAAGA AATACTCAAG GCATTTAAAC TATTTGATGA TGATGATTCA GGTAAAATAA
421GCTTGAGGAA TTTGCGACGT GTTGCTAGAG AATTGGGTGA AAACATGAGT GATGAAGAAC
481TTCGAGCTAT GATAGAAGAA TTTGACAAAG ATGGTGATGG AGAAATAAAC CAAGAGGAGT
541TCATTGCTAT TATGACTGGT GACATTTAAC CAACTTTCTT GTACAAAGTt ggcattataa
601gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)