Construct: ORF ccsbBroadEn_00462

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007056.1_s300c1, BRDN0000393124
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DR1 (1810)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1810 DR1 down-regulator of transcrip... NM_001938.3 100% 100%
2 mouse 13486 Dr1 down-regulator of transcrip... NM_026106.4 93.1% 99.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
594
ORF length:
528
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TTCCTCGTCT GGCAACGATG ATGATCTCAC TATCCCCAGA GCTGCTATCA
121ATAAAATGAT CAAAGAGACT CTTCCTAATG TCCGGGTGGC CAACGATGCT CGAGAGCTGG
181TGGTGAACTG CTGCACTGAA TTCATTCACC TTATATCTTC TGAAGCCAAT GAGATTTGTA
241ACAAATCGGA AAAGAAGACC ATCTCACCAG AGCATGTCAT ACAAGCACTA GAAAGTTTGG
301GATTTGGCTC TTACATCAGT GAAGTAAAAG AAGTCTTGCA AGAGTGTAAA ACAGTAGCAT
361TAAAAAGAAG AAAGGCCAGT TCTCGTTTGG AAAACCTTGG CATTCCTGAA GAAGAGTTAT
421TGAGACAGCA ACAAGAATTA TTTGCAAAAG CTAGACAGCA ACAAGCAGAA TTGGCCCAAC
481AGGAATGGCT TCAAATGCAG CAAGCTGCCC AACAAGCCCA GCTTGCTGCT GCCTCAGCCA
541GTGCATCTAA TCAGGCGGGA TCTTCTCAGG ATGAAGAAGA TGATGATGAT ATCTGCCCAA
601CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)