Construct: ORF ccsbBroadEn_00496

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014808.1_s300c1, BRDN0000396059
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ELF4 (2000)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2000 ELF4 E74 like ETS transcription ... NM_001127197.2 100% 100%
2 human 2000 ELF4 E74 like ETS transcription ... NM_001421.3 100% 100%
3 human 2000 ELF4 E74 like ETS transcription ... XM_005262389.3 100% 100%
4 human 2000 ELF4 E74 like ETS transcription ... XM_011531307.3 89.7% 89.7% 0_1ins204
5 human 2000 ELF4 E74 like ETS transcription ... XM_011531308.3 88.2% 87.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2055
ORF length:
1989
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TATTACCCTA CAGCCCAGTG ACCTGATCTT TGAGTTCGCA AGCAACGGGA
121TGGATGATGA TATCCACCAG CTGGAAGACC CCTCTGTGTT CCCAGCTGTG ATCGTGGAGC
181AGGTACCCTA CCCTGATTTA CTGCATCTGT ACTCGGGACT GGAGTTGGAC GACGTTCACA
241ATGGCATCAT AACAGACGGG ACCTTGTGCA TGACGCAGGA TCAGATCCTG GAAGGCAGTT
301TTTTGCTGAC AGATGACAAT GAGGCCACCT CGCACACCAT GTCAACCGCG GAAGTCTTAC
361TCAATATGGA GTCTCCCAGC GATATCCTGG ATGAGAAGCA GATCTTCAGT ACCTCCGAAA
421TGCTTCCAGA CTCGGACCCT GCACCAGCTG TCACTCTGCC CAACTACCTG TTTCCTGCCT
481CTGAGCCCGA TGCCCTGAAC AGGGCGGGTG ACACTAGTGA CCAGGAGGGG CATTCTCTGG
541AGGAGAAGGC CTCCAGAGAG GAAAGTGCCA AGAAGACTGG GAAATCAAAG AAGAGAATCC
601GGAAGACCAA GGGCAACCGA AGTACCTCAC CTGTCACTGA CCCCAGCATC CCCATTAGGA
661AGAAATCAAA GGATGGCAAA GGCAGCACCA TCTATCTGTG GGAGTTCCTC CTGGCTCTTC
721TGCAAGACAG AAACACCTGT CCCAAGTACA TCAAGTGGAC CCAGCGAGAG AAAGGCATCT
781TCAAACTGGT GGACTCCAAA GCTGTGTCCA AGCTGTGGGG GAAGCAGAAA AACAAGCCTG
841ACATGAACTA TGAGACAATG GGGCGGGCAC TAAGATACTA CTACCAAAGA GGCATACTGG
901CCAAAGTGGA AGGGCAGAGG CTGGTGTACC AGTTTAAGGA GATGCCCAAG GACCTGGTGG
961TCATTGAAGA TGAGGATGAG AGCAGCGAAG CCACAGCAGC CCCACCTCAG GCCTCCACGG
1021CCTCTGTGGC CTCTGCCAGT ACCACCCGGC GAACCAGCTC CAGGGTCTCA TCCAGATCTG
1081CCCCCCAGGG CAAGGGCAGC TCTTCTTGGG AGAAGCCAAA AATTCAGCAT GTCGGTCTCC
1141AGCCATCTGC GAGTCTGGAA TTGGGACCGT CGCTAGACGA GGAGATCCCC ACTACCTCCA
1201CCATGCTCGT CTCTCCAGCA GAGGGCCAGG TCAAGCTCAC CAAAGCTGTG AGTGCATCTT
1261CAGTGCCCAG CAACATCCAC CTAGGAGTGG CCCCCGTGGG GTCGGGCTCG GCCCTGACCC
1321TGCAGACGAT CCCACTGACC ACGGTGCTGA CCAATGGGCC TCCTGCCAGT ACTACTGCTC
1381CCACTCAGCT CGTTCTCCAG AGTGTTCCAG CGGCCTCTAC TTTCAAGGAC ACCTTCACTT
1441TGCAGGCCTC TTTCCCCCTG AACGCCAGTT TCCAAGACAG CCAGGTGGCA GCCCCAGGGG
1501CTCCACTGAT TCTCAGTGGC CTCCCCCAAC TTCTGGCTGG GGCCAACCGT CCGACCAACC
1561CGGCGCCACC CACGGTCACA GGGGCTGGAC CAGCAGGGCC CAGCTCTCAG CCCCCTGGGA
1621CTGTCATTGC TGCCTTCATC AGGACTTCTG GCACTACAGC AGCCCCTAGG GTCAAGGAGG
1681GGCCACTGAG GTCCTCCTCC TATGTTCAGG GTATGGTGAC GGGGGCCCCC ATGGAGGGGC
1741TGCTGGTTCC TGAAGAGACC CTGAGGGAGC TCCTGAGAGA TCAGGCTCAT CTTCAGCCAC
1801TTCCAACCCA GGTGGTTTCC AGGGGTTCCC ACAATCCGAG CCTTCTGGGC AACCAGACTT
1861TGTCTCCTCC CAGCCGCCCC ACTGTTGGGC TGACCCCAGT GGCTGAACTT GAGCTCTCCT
1921CAGGCTCAGG GTCCCTGCTG ATGGCTGAGC CTAGTGTGAC CACATCTGGG AGCCTTCTGA
1981CAAGATCCCC CACCCCAGCC CCTTTCTCCC CATTCAACCC TACTTCCCTC ATTAAGATGG
2041AGCCCCATGA CATATACCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
2101tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)