Construct: ORF ccsbBroadEn_00678
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF004150.1_s300c1, BRDN0000389921
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- GPR37 (2861)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2861 | GPR37 | G protein-coupled receptor 37 | NM_005302.5 | 99.9% | 100% | 1047T>C |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1905
- ORF length:
- 1839
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGCG AGCCCCGGGC GCGCTTCTCG CCCGCATGTC GCGGCTACTG CTTCTGCTAC 121 TGCTCAAGGT GTCTGCCTCT TCTGCCCTCG GGGTCGCCCC TGCGTCCAGA AACGAAACTT 181 GTCTGGGGGA GAGCTGTGCA CCTACAGTGA TCCAGCGCCG CGGCAGGGAC GCCTGGGGAC 241 CGGGAAATTC TGCAAGAGAC GTTCTGCGAG CCCGAGCACC CAGGGAGGAG CAGGGGGCAG 301 CGTTTCTTGC GGGACCCTCC TGGGACCTGC CGGCGGCCCC GGGCCGTGAC CCGGCTGCAG 361 GCAGAGGGGC GGAGGCGTCG GCAGCCGGAC CCCCGGGACC TCCAACCAGG CCACCTGGCC 421 CCTGGAGGTG GAAAGGTGCT CGGGGTCAGG AGCCTTCTGA AACTTTGGGG AGAGGGAACC 481 CCACGGCCCT CCAGCTCTTC CTTCAGATCT CAGAGGAGGA AGAGAAGGGT CCCAGAGGCG 541 CTGGCATTTC CGGGCGTAGC CAGGAGCAGA GTGTGAAGAC AGTCCCCGGA GCCAGCGATC 601 TTTTTTACTG GCCAAGGAGA GCCGGGAAAC TCCAGGGTTC CCACCACAAG CCCCTGTCCA 661 AGACGGCCAA TGGACTGGCG GGGCACGAAG GGTGGACAAT TGCACTCCCG GGCCGGGCGC 721 TGGCCCAGAA TGGATCCTTG GGTGAAGGAA TCCATGAGCC TGGGGGTCCC CGCCGGGGAA 781 ACAGCACGAA CCGGCGTGTG AGACTGAAGA ACCCCTTCTA CCCGCTGACC CAGGAGTCCT 841 ATGGAGCCTA CGCGGTCATG TGTCTGTCCG TGGTGATCTT CGGGACCGGC ATCATTGGCA 901 ACCTGGCGGT GATGTGCATC GTGTGCCACA ACTACTACAT GCGGAGCATC TCCAACTCCC 961 TCTTGGCCAA CCTGGCCTTC TGGGACTTTC TCATCATCTT CTTCTGCCTT CCGCTGGTCA 1021 TCTTCCACGA GCTGACCAAG AAGTGGCTGC TGGAGGACTT CTCCTGCAAG ATCGTGCCCT 1081 ATATAGAGGT CGCTTCTCTG GGAGTCACCA CCTTCACCTT ATGTGCTCTG TGCATAGACC 1141 GCTTCCGTGC TGCCACCAAC GTACAGATGT ACTACGAAAT GATCGAAAAC TGTTCCTCAA 1201 CAACTGCCAA ACTTGCTGTT ATATGGGTGG GAGCTCTATT GTTAGCACTT CCAGAAGTTG 1261 TTCTCCGCCA GCTGAGCAAG GAGGATTTGG GGTTTAGTGG CCGAGCTCCG GCAGAAAGGT 1321 GCATTATTAA GATCTCTCCT GATTTACCAG ACACCATCTA TGTTCTAGCC CTCACCTACG 1381 ACAGTGCGAG ACTGTGGTGG TATTTTGGCT GTTACTTTTG TTTGCCCACG CTTTTCACCA 1441 TCACCTGCTC TCTAGTGACT GCGAGGAAAA TCCGCAAAGC AGAGAAAGCC TGTACCCGAG 1501 GGAATAAACG GCAGATTCAA CTAGAGAGTC AGATGAACTG TACAGTAGTG GCACTGACCA 1561 TTTTATATGG ATTTTGCATT ATTCCTGAAA ATATCTGCAA CATTGTTACT GCCTACATGG 1621 CTACAGGGGT TTCACAGCAG ACAATGGACC TCCTTAATAT CATCAGCCAG TTCCTTTTGT 1681 TCTTTAAGTC CTGTGTCACC CCAGTCCTCC TTTTCTGTCT CTGCAAACCC TTCAGTCGGG 1741 CCTTCATGGA GTGCTGCTGC TGTTGCTGTG AGGAATGCAT TCAGAAGTCT TCAACGGTGA 1801 CCAGTGATGA CAATGACAAC GAGTACACCA CGGAACTCGA ACTCTCGCCT TTCAGTACCA 1861 TACGCCGTGA AATGTCCACT TTTGCTTCTG TCGGAACTCA TTGCTGCCCA ACTTTCTTGT 1921 ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c