Construct: ORF ccsbBroadEn_00893

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011203.1_s300c1, BRDN0000398148
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KCND2 (3751)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3751 KCND2 potassium voltage-gated cha... NM_012281.3 100% 100%
2 human 3751 KCND2 potassium voltage-gated cha... XM_011516165.3 59.3% 58.5% (many diffs)
3 mouse 16508 Kcnd2 potassium voltage-gated cha... NM_019697.3 88.8% 99% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1959
ORF length:
1890
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCGGCGGGG GTGGCAGCGT GGCTGCCTTT TGCAAGGGCA GCGGCTATCG
121GGTGGATGCC TGTGGCCTCG GGGCCTATGC CGGCTCCCCC GAGGCAGGAG AGGAAAAGGA
181CCCAAGATGC TCTCATTGTG CTGAATGTGA GTGGCACCCG CTTCCAGACG TGGCAGGACA
241CCCTGGAACG TTACCCAGAC ACTCTACTGG GCAGTTCTGA GAGGGACTTT TTCTACCACC
301CAGAAACTCA GCAGTATTTC TTTGACCGTG ACCCAGACAT CTTCCGCCAC ATCCTGAATT
361TCTACCGCAC TGGGAAGCTC CACTATCCTC GCCACGAGTG CATCTCTGCT TACGATGAAG
421AACTGGCCTT CTTTGGCCTC ATCCCGGAAA TCATCGGCGA CTGCTGTTAT GAGGAGTACA
481AGGATCGCAG GCGAGAGAAC GCCGAGCGCC TGCAGGACGA CGCGGATACC GACACCGCTG
541GGGAGAGCGC CTTGCCCACC ATGACTGCAA GGCAGAGGGT CTGGAGGGCC TTCGAGAACC
601CCCACACCAG CACGATGGCC CTGGTGTTCT ACTATGTCAC GGGGTTTTTC ATTGCCGTCT
661CTGTCATCGC GAATGTGGTG GAAACAGTGC CGTGCGGATC AAGCCCAGGT CACATTAAAG
721AACTGCCCTG TGGAGAGCGG TATGCTGTGG CCTTCTTCTG CTTGGACACG GCCTGCGTCA
781TGATCTTCAC AGTTGAGTAT TTGCTTCGCC TGGCTGCAGC GCCTAGTCGT TACCGTTTTG
841TGCGTAGTGT CATGAGTATC ATCGACGTGG TGGCCATCCT GCCTTATTAC ATTGGGCTGG
901TGATGACAGA CAATGAGGAC GTCAGCGGAG CCTTTGTCAC ACTCCGAGTC TTCCGGGTCT
961TCAGGATCTT TAAGTTTTCC CGCCACTCTC AAGGCCTGCG CATCCTGGGG TACACACTGA
1021AGAGTTGTGC CTCAGAATTG GGCTTCTTGC TTTTCTCGCT CACCATGGCT ATCATCATCT
1081TCGCTACAGT TATGTTCTAC GCAGAGAAGG GGTCTTCGGC TAGCAAGTTC ACCAGCATCC
1141CTGCAGCCTT CTGGTATACC ATCGTCACCA TGACAACACT AGGGTATGGT GACATGGTGC
1201CAAAAACCAT AGCAGGGAAG ATTTTTGGTT CTATCTGTTC GCTGAGTGGG GTCTTGGTCA
1261TTGCTCTACC TGTTCCGGTG ATTGTATCCA ACTTCAGTCG CATCTACCAC CAGAATCAAC
1321GAGCAGACAA ACGAAGGGCA CAAAAGAAAG CTAGACTGGC CAGGATCCGG GCAGCCAAAA
1381GCGGAAGCGC AAATGCTTAC ATGCAGAGCA AACGGAATGG TTTACTCAGT AATCAGCTGC
1441AGTCCTCAGA GGATGAGCAG GCTTTTGTTA GCAAATCCGG CTCCAGCTTT GAAACCCAGC
1501ACCACCACCT GCTTCACTGC CTGGAAAAAA CCACGAATCA CGAGTTTGTG GACGAACAAG
1561TCTTTGAAGA AAGCTGCATG GAAGTTGCAA CTGTTAATCG TCCTTCAAGT CACAGTCCTT
1621CACTGTCTTC ACAACAAGGA GTCACCAGCA CCTGCTGTTC ACGACGACAC AAAAAAACTT
1681TTCGCATCCC AAATGCCAAT GTATCAGGAA GCCATCAAGG TAGTATACAA GAACTCAGCA
1741CGATTCAGAT CAGATGTGTG GAGAGAACAC CTCTGTCTAA CAGCCGATCC AGTTTAAATG
1801CCAAAATGGA AGAGTGTGTT AAACTAAACT GTGAACAACC TTATGTGACT ACAGCAATAA
1861TAAGCATCCC AACACCTCCA GTAACCACAC CAGAAGGAGA CGATAGGCCA GAATCCCCTG
1921AGTACTCAGG AGGAAATATT GTCAGAGTTT CTGCTTTGTT GCCAACTTTC TTGTACAAAG
1981Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)