Construct: ORF ccsbBroadEn_01134

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002098.1_s300c1, BRDN0000386918
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
P2RX5 (5026)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5026 P2RX5 purinergic receptor P2X 5 NM_002561.4 100% 100%
2 human 5026 P2RX5 purinergic receptor P2X 5 NM_001204519.2 99.7% 99.5% 614_615insAAG
3 human 5026 P2RX5 purinergic receptor P2X 5 NM_001204520.2 94.3% 94.3% 286_287ins72
4 human 5026 P2RX5 purinergic receptor P2X 5 NM_175080.3 94% 93.8% 286_287ins72;542_543insAAG
5 human 100533970 P2RX5-TAX1BP3 P2RX5-TAX1BP3 readthrough (... NR_037928.1 20.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1332
ORF length:
1266
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GCAGGCGGGC TGCAAGGGGC TCTGCCTGTC GCTGTTCGAC TACAAGACCG
121AGAAGTATGT CATCGCCAAG AACAAGAAGG TGGGCCTGCT GTACCGGCTG CTGCAGGCCT
181CCATCCTGGC GTACCTGGTC GTATGGGTGT TCCTGATAAA GAAGGGTTAC CAAGACGTCG
241ACACCTCCCT GCAGAGTGCT GTCATCACCA AAGTCAAGGG CGTGGCCTTC ACCAACACCT
301CGGATCTTGG GCAGCGGATC TGGGATGTCG CCGACTACGT CATTCCAGCC CAGGGAGAGA
361ACGTCTTTTT TGTGGTCACC AACCTGATTG TGACCCCCAA CCAGCGGCAG AACGTCTGTG
421CTGAGAATGA AGGCATTCCT GATGGCGCGT GCTCCAAGGA CAGCGACTGC CACGCTGGGG
481AAGCGGTTAC AGCTGGAAAC GGAGTGAAGA CCGGCCGCTG CCTGCGGAGA GAGAACTTGG
541CCAGGGGCAC CTGTGAGATC TTTGCCTGGT GCCCGTTGGA GACAAGCTCC AGGCCGGAGG
601AGCCATTCCT GAAGGAGGCC GAAGACTTCA CCATTTTCAT AAAGAACCAC ATCCGTTTCC
661CCAAATTCAA CTTCTCCAAA AGCAATGTGA TGGACGTCAA GGACAGATCT TTCCTGAAAT
721CATGCCACTT TGGCCCCAAG AACCACTACT GCCCCATCTT CCGACTGGGC TCCGTGATCC
781GCTGGGCCGG GAGCGACTTC CAGGATATAG CCCTGGAGGG TGGCGTGATA GGAATTAATA
841TTGAATGGAA CTGTGATCTT GATAAAGCTG CCTCTGAGTG CCACCCTCAC TATTCTTTTA
901GCCGTCTGGA CAATAAACTT TCAAAGTCTG TCTCCTCCGG GTACAACTTC AGATTTGCCA
961GATATTACCG AGACGCAGCC GGGGTGGAGT TCCGCACCCT GATGAAAGCC TACGGGATCC
1021GCTTTGACGT GATGGTGAAC GGCAAGGGTG CTTTCTTCTG CGACCTGGTA CTCATCTACC
1081TCATCAAAAA GAGAGAGTTT TACCGTGACA AGAAGTACGA GGAAGTGAGG GGCCTAGAAG
1141ACAGTTCCCA GGAGGCCGAG GACGAGGCAT CGGGGCTGGG GCTATCTGAG CAGCTCACAT
1201CTGGGCCAGG GCTGCTGGGG ATGCCGGAGC AGCAGGAGCT GCAGGAGCCA CCCGAGGCGA
1261AGCGTGGAAG CAGCAGTCAG AAGGGGAACG GATCTGTGTG CCCACAGCTC CTGGAGCCCC
1321ACAGGAGCAC GTGCCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1381caatttgttg caacgaac

Download FASTA (ORF) (Full)