Construct: ORF ccsbBroadEn_01619

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007656.1_s300c1, BRDN0000387105
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
STXBP3 (6814)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6814 STXBP3 syntaxin binding protein 3 NM_007269.4 100% 100%
2 mouse 20912 Stxbp3 syntaxin binding protein 3 NM_011504.1 87.7% 91.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1842
ORF length:
1776
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GCCGCCGGTG GCAGAGAGGG GGCTAAAGAG CGTCGTGTGG CAGAAGATAA
121AAGCAACAGT GTTTGATGAC TGCAAGAAAG AAGGCGAATG GAAGATAATG CTTTTAGATG
181AATTTACCAC TAAGCTTTTG GCATCGTGTT GCAAAATGAC AGATCTTCTA GAAGAAGGTA
241TTACTGTTGT AGAGAATATT TATAAGAACC GTGAACCTGT CAGACAAATG AAAGCTCTTT
301ATTTCATCAC TCCGACATCA AAGTCTGTAG ATTGTTTCTT ACATGATTTT GCAAGTAAAT
361CGGAGAACAA GTATAAAGCA GCATATATTT ACTTCACTGA CTTTTGCCCT GATAATCTCT
421TTAACAAAAT TAAGGCTTCT TGCTCCAAGT CAATAAGAAG ATGTAAAGAA ATAAATATTT
481CCTTCATTCC ACATGAATCT CAGGTGTATA CTCTTGATGT ACCAGATGCA TTCTATTACT
541GTTATAGTCC AGACCCTGGT AATGCAAAGG GAAAAGATGC CATTATGGAA ACAATGGCTG
601ACCAGATAGT TACAGTGTGT GCCACCTTGG ATGAAAATCC CGGAGTAAGA TATAAAAGTA
661AACCTCTAGA TAATGCCAGT AAGCTTGCAC AGCTTGTTGA AAAAAAGCTT GAAGACTACT
721ACAAGATTGA TGAAAAGAGC CTAATAAAGG GTAAAACTCA TTCACAGCTC TTAATAATTG
781ATCGTGGCTT TGATCCTGTG TCCACTGTCC TGCATGAACT GACCTTTCAG GCAATGGCAT
841ATGATCTACT ACCAATTGAG AATGATACAT ACAAATATAA AACAGATGGA AAAGAAAAGG
901AGGCCATCCT TGAAGAAGAA GATGACCTCT GGGTTAGAAT TCGACATCGA CATATTGCGG
961TTGTGTTAGA GGAAATTCCC AAGCTTATGA AAGAAATTTC ATCAACAAAG AAAGCAACAG
1021AAGGAAAGAC ATCACTTAGT GCTCTTACCC AGCTGATGAA AAAGATGCCC CATTTCCGAA
1081AACAGATTAC TAAGCAAGTT GTCCATCTTA ACTTAGCAGA AGATTGCATG AATAAGTTCA
1141AGCTTAATAT AGAAAAGCTC TGCAAAACTG AACAGGACCT GGCACTTGGA ACTGATGCAG
1201AAGGACAGAA GGTGAAAGAT TCCATGCGAG TACTCCTTCC AGTTCTACTC AACAAAAATC
1261ATGATAATTG TGATAAAATA AGAGCAATTC TACTTTATAT CTTCAGTATT AATGGAACTA
1321CGGAAGAAAA TTTGGACAGG TTGATCCAGA ATGTAAAGAT AGAAAATGAG AGTGACATGA
1381TTCGTAACTG GAGTTACCTT GGTGTTCCCA TTGTTCCCCA ATCTCAACAA GGCAAACCGT
1441TAAGAAAGGA TCGGTCTGCA GAAGAAACTT TTCAGCTCTC TCGGTGGACA CCTTTTATCA
1501AAGATATTAT GGAGGATGCT ATTGATAATA GATTAGATTC AAAAGAATGG CCATATTGTT
1561CCCAGTGTCC AGCAGTATGG AATGGTTCAG GAGCTGTAAG TGCTCGCCAG AAACCCAGAG
1621CTAATTATTT AGAAGACCGA AAAAATGGGT CAAAGCTGAT TGTTTTTGTA ATTGGAGGGA
1681TCACATACTC TGAAGTGCGT TGTGCTTATG AAGTTTCTCA GGCACATAAA TCCTGTGAAG
1741TTATTATTGG TTCTACACAT GTTTTAACAC CCAAAAAGCT GTTGGATGAT ATAAAGATGC
1801TGAATAAACC CAAGGATAAA GTCTCCTTAA TTAAAGATGA ATACCCAACT TTCTTGTACA
1861AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)