Construct: ORF ccsbBroadEn_01796

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007370.1_s300c1, BRDN0000396036
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
ZNF23 (7571)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7571 ZNF23 zinc finger protein 23 NM_001304492.2 100% .9%
2 human 7571 ZNF23 zinc finger protein 23 NM_145911.3 100% .9%
3 human 7571 ZNF23 zinc finger protein 23 NM_001304493.2 90.9% 1% 0_1ins174
4 human 7571 ZNF23 zinc finger protein 23 NM_001304494.2 90.9% 1% 0_1ins174
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
58
ORF end:
124
ORF length:
66
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAATG
61TTGGCATGCT GGAGAATTAT GGGAATGTGG CCTCCCTGGG ATTTCCACTT CTCAAACCTG
121CTGTGATCTC ACAACTGGAG GGAGGAAGTG AGCTGGGGGG CTCATCTCCA CTGGCTGCAG
181GAACAGGCCT CCAGGGCCTC CAGACTGATA TTCAGACTGA CAATGATTTG ACAAAGGAAA
241TGTATGAAGG AAAAGAGAAT GTATCATTTG AACTTCAAAG AGACTTTTCC CAGGAAACAG
301ACTTTTCAGA AGCCTCTCTT CTAGAGAAAC AACAGGAAGT CCACTCAGCA GGAAATATAA
361AGAAGGAGAA GAGCAACACC ATTGATGGAA CAGTGAAAGA TGAGACAAGC CCCGTGGAGG
421AGTGTTTTTT TAGTCAAAGT TCAAACTCAT ATCAGTGTCA TACCATCACT GGAGAGCAGC
481CCTCTGGGTG TACAGGATTG GGGAAATCCA TCAGCTTTGA TACAAAACTC GTGAAGCATG
541AAATAATTAA TTCTGAGGAA AGACCTTTCA AATGTGAAGA ATTAGTAGAG CCCTTTAGGT
601GTGACTCTCA ACTTATTCAA CATCAAGAGA ACAACACTGA GGAAAAGCCT TATCAGTGTT
661CGGAGTGTGG CAAAGCTTTC AGCATTAATG AGAAATTAAT TTGGCATCAG AGACTTCACA
721GTGGGGAGAA ACCCTTCAAA TGTGTGGAGT GTGGGAAAAG CTTCAGCTAC AGTTCCCATT
781ATATCACACA TCAGACAATC CACAGTGGGG AGAAGCCCTA TCAGTGTAAG ATGTGTGGGA
841AGGCCTTCAG TGTTAATGGA AGCCTAAGTA GGCATCAGAG AATCCATACG GGAGAGAAGC
901CCTATCAGTG CAAGGAATGT GGAAATGGCT TCAGCTGTAG TTCTGCATAT ATTACACATC
961AGAGAGTCCA CACTGGAGAG AAACCTTACG AGTGTAATGA CTGTGGGAAA GCGTTCAATG
1021TTAATGCAAA ATTAATTCAA CATCAGAGAA TCCATACTGG AGAGAAACCT TATGAATGTA
1081ATGAATGTGG AAAAGGCTTC AGGTGCAGCT CCCAGCTTAG GCAGCATCAG AGCATCCACA
1141CAGGAGAAAA GCCCTATCAG TGTAAAGAGT GTGGAAAAGG CTTCAATAAT AATACAAAAC
1201TCATTCAGCA TCAGAGAATC CACACAGGTG AGAAACCCTA TGAATGCACT GAATGTGGAA
1261AAGCCTTCAG TGTCAAAGGG AAGTTAATCC AACACCAGAG AATTCACACA GGCGAGAAAC
1321CCTATGAGTG TAATGAATGC GGGAAAGCCT TCAGATGTAA CTCCCAATTT CGGCAGCATC
1381TGAGAATTCA CACTGGGGAG AAGCCCTATG AGTGTAATGA GTGTGGAAAG GCCTTCAGCG
1441TTAATGGGAA ACTAATGCGG CATCAGAGAA TTCACACTGG GGAGAAACCT TTTGAATGTA
1501ATGAGTGTGG GAGATGCTTT ACTTCTAAAA GAAACCTACT TGATCATCAC CGAATCCATA
1561CTGGAGAAAA GCCCTATCAA TGTAAGGAAT GTGGGAAAGC CTTCAGTATC AATGCCAAAC
1621TAACTAGGCA TCAGAGGATA CATACTGGGG AGAAACCTTT CAAATGTATG GAATGTGAGA
1681AAGCATTCAG CTGTAGTTCT AACTATATTG TGCACCAGAG AATCCATACA GGAGAGAAAC
1741CCTTTCAGTG TAAGGAGTGT GGAAAAGCCT TCCATGTTAA TGCCCATTTA ATTCGGCATC
1801AGAGAAGCCA CACTGGGGAG AAACCCTTCA GATGTGTGGA ATGTGGCAAA GGCTTCAGCT
1861TTAGTTCTGA CTACATTATA CATCAGACAG TCCACACTTG GAAGAAACCC TATATGTGTA
1921GTGTGTGTGG GAAAGCATTC AGGTTTAGCT TCCAGCTCAG TCAGCATCAG AGTGTCCATA
1981GTGAAGGAAA ATCCTACCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
2041tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)