Construct: ORF ccsbBroadEn_01852
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF002460.1_s300c1, BRDN0000396601
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ZNF212 (7988)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 7988 | ZNF212 | zinc finger protein 212 | NM_012256.4 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1551
- ORF length:
- 1485
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGGC GGAGTCGGCG CCTGCTCGGC ACAGGAGAAA ACGACGCTCC ACACCTTTAA 121 CTTCTTCCAC ACTTCCTTCA CAAGCAACAG AGAAAAGCTC CTATTTTCAG ACCACCGAGA 181 TTTCACTCTG GACGGTGGTG GCCGCTATTC AGGCTGTGGA GAAGAAGATG GAGTCCCAGG 241 CTGCCCGGCT ACAGAGCCTG GAGGGGCGCA CGGGGACAGC CGAGAAGAAG CTGGCTGACT 301 GCGAGAAGAT GGCCGTGGAG TTCGGGAACC AGCTGGAGGG CAAGTGGGCC GTGCTGGGGA 361 CCCTGCTGCA GGAGTATGGG CTACTGCAGA GGCGGCTGGA GAACGTGGAG AACCTGCTGC 421 GCAACAGGAA CTTCTGGATC CTGCGGCTGC CCCCGGGCAG CAAGGGGGAG GCCCCCAAGG 481 TGTCCAGGTC ACTGGAGAAT GATGGCGTCT GTTTCACCGA GCAGGAATGG GAGAATCTGG 541 AGGATTGGCA GAAGGAGCTC TACAGAAACG TGATGGAGAG TAACTATGAG ACACTGGTCT 601 CTCTGAAGGT CCTTGGCCAG ACAGAGGGAG AAGCGGAGTT GGGTACAGAG ATGCTGGGTG 661 ACTTGGAAGA GGAAGGTCCT GGTGGTGCCC ACCCAGCAGG TGGGGTCATG ATCAAACAGG 721 AGCTACAGTA TACACAGGAA GGCCCTGCGG ATCTTCCTGG AGAGTTCTCA TGCATTGCTG 781 AAGAGCAGGC TTTCCTGAGC CCAGAGCAGA CCGAACTCTG GGGTGGTCAG GGCAGTTCTG 841 TCCTCTTGGA AACAGGTCCT GGGGACTCTA CTCTAGAGGA GCCTGTTGGT AGTAGAGTTC 901 CTAGCAGCAG CAGAACTGTG GGCTGCCCGA AGCAGAAATC TCATAGGCAG GTACAGCTGG 961 ACCAGGAATG TGGGCAGGGC CTGAAGCTGA AAAAGGACAC TTCCCGCCCC TACGAATGTT 1021 CTGAGTGTGA GATCACCTTC CGCTATAAGC AGCAGCTGGC CACACATCTG CGCAGCCACT 1081 CTGGGTGGGG GTCTTGTACA CCTGAGGAGC CAGAGGAGAG CCTTAGGCCC AGGCCACGGC 1141 TGAAACCACA GACCAAAAAG GCCAAGCTGC ATCAGTGTGA TGTGTGCCTG AGGAGCTTCA 1201 GCTGCAAGGT GAGCCTGGTG ACCCATCAGC GTTGCCACCT GCAGGAGGGG CCCAGTGCCG 1261 GCCAGCATGT CCAAGAGAGG TTCTCACCCA ACAGCCTGGT TGCCCTGCCT GGCCACATCC 1321 CTTGGAGGAA AAGCCGGAGT TCCCTCATCT GTGGTTACTG TGGCAAGAGC TTCAGTCACC 1381 CATCTGACTT GGTGCGGCAC CAGCGCATCC ACACGGGTGA GCGGCCCTAC AGCTGCACTG 1441 AGTGTGAGAA GAGCTTTGTC CAGAAGCAGC ACCTCCTGCA GCACCAGAAG ATCCACCAGC 1501 GGGAGCGGGG TGGGCTGGCC CTGGAGCCCG GAAGGCCCAA TGGCCTGCTT TACCCAACTT 1561 TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac