Construct: ORF ccsbBroadEn_02239

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003453.1_s300c1, BRDN0000387737
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RASSF2 (9770)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9770 RASSF2 Ras association domain fami... NM_014737.3 100% 100%
2 human 9770 RASSF2 Ras association domain fami... NM_170774.1 100% 100%
3 human 9770 RASSF2 Ras association domain fami... XM_005260895.3 100% 100%
4 human 9770 RASSF2 Ras association domain fami... XM_017028150.1 100% 100%
5 human 9770 RASSF2 Ras association domain fami... XM_017028151.1 100% 100%
6 human 9770 RASSF2 Ras association domain fami... XM_017028152.1 100% 100%
7 human 9770 RASSF2 Ras association domain fami... XM_017028153.1 100% 100%
8 human 9770 RASSF2 Ras association domain fami... XM_011529410.1 99.3% 99% 377_382delGTACAT
9 human 9770 RASSF2 Ras association domain fami... XM_011529411.1 99.3% 99% 377_382delGTACAT
10 human 9770 RASSF2 Ras association domain fami... XM_011529412.2 99.3% 99% 377_382delGTACAT
11 human 9770 RASSF2 Ras association domain fami... XM_017028149.1 99.3% 99% 377_382delGTACAT
12 mouse 215653 Rassf2 Ras association (RalGDS/AF-... NM_175445.4 86.7% 92.6% (many diffs)
13 mouse 215653 Rassf2 Ras association (RalGDS/AF-... XM_006499139.3 86.7% 92.6% (many diffs)
14 mouse 215653 Rassf2 Ras association (RalGDS/AF-... XM_006499140.3 86.7% 92.6% (many diffs)
15 mouse 215653 Rassf2 Ras association (RalGDS/AF-... XM_006499141.2 86.7% 92.6% (many diffs)
16 mouse 215653 Rassf2 Ras association (RalGDS/AF-... XM_006499142.2 86.7% 92.6% (many diffs)
17 mouse 215653 Rassf2 Ras association (RalGDS/AF-... XM_006499143.3 86.7% 92.6% (many diffs)
18 mouse 215653 Rassf2 Ras association (RalGDS/AF-... XM_006499144.3 86.7% 92.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1047
ORF length:
978
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGACTACAGC CACCAAACGT CCCTAGTCCC ATGTGGACAA GATAAATACA
121TTTCCAAAAA TGAACTTCTC TTGCATCTGA AGACCTACAA CTTGTACTAT GAAGGCCAGA
181ATTTACAGCT CCGGCACCGG GAGGAAGAAG ACGAGTTCAT TGTGGAGGGG CTCCTGAACA
241TCTCCTGGGG CCTGCGCCGG CCCATTCGCC TGCAGATGCA GGATGACAAC GAACGCATTC
301GACCCCCTCC ATCCTCCTCC TCCTGGCACT CTGGCTGTAA CCTGGGGGCT CAGGGAACCA
361CTCTGAAGCC CCTGACTGTG CCCAAAGTTC AGATCTCAGA GGTGGATGCC CCGCCGGAGG
421GTGACCAGAT GCCAAGCTCC ACAGACTCCA GGGGCCTGAA GCCCCTGCAG GAGGACACCC
481CACAGCTGAT GCGCACACGC AGTGATGTTG GGGTGCGTCG CCGTGGCAAT GTGAGGACGC
541CTAGTGACCA GCGGCGAATC AGACGCCACC GCTTCTCCAT CAACGGCCAT TTCTACAACC
601ATAAGACATC CGTGTTCACA CCAGCCTATG GCTCTGTCAC CAACGTCCGC ATCAACAGCA
661CCATGACCAC CCCACAGGTC CTGAAGCTGC TGCTCAACAA ATTTAAGATT GAGAATTCAG
721CAGAGGAGTT TGCCTTGTAC GTGGTCCATA CGAGTGGTGA GAAACAGAAG CTGAAGGCCA
781CCGATTACCC GCTGATTGCC CGAATCCTCC AGGGCCCATG TGAGCAGATC TCCAAAGTGT
841TCCTAATGGA GAAGGACCAG GTGGAGGAAG TCACCTACGA CGTGGCCCAG TATATAAAGT
901TCGAGATGCC GGTACTTAAA AGCTTCATTC AGAAGCTCCA GGAGGAAGAA GATCGGGAAG
961TAAAGAAGCT GATGCGCAAG TACACCGTGC TCCGGCTAAT GATTCGACAG AGGCTGGAGG
1021AGATAGCCGA GACCCCAGCA ACAATCTTGC CAACTTTCTT GTACAAAGTt ggcattataa
1081gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)