Construct: ORF ccsbBroadEn_02349

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016351.1_s300c1, BRDN0000391350
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MPHOSPH9 (10198)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018679.1 100% 100%
2 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018680.1 100% 100%
3 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018678.1 88.6% 88.6% 1_255del;991_992ins126
4 human 10198 MPHOSPH9 M-phase phosphoprotein 9 NM_022782.4 87.1% 87.1% 1_456del
5 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018673.1 87.1% 87.1% 1_456del
6 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_011537740.2 84.3% 84.3% 1_456del;3451_3452delCT;3453_3454ins98
7 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_011537741.2 84.3% 84.3% 1_456del;3451_3452delCT;3453_3454ins98
8 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018674.1 84.2% 84.1% 1_456del;2354_2355ins102
9 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018675.1 83.6% 83.6% 1_456del;1192_1193ins126
10 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018676.1 82.7% 82.7% 1_456del;1781_1782ins156
11 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018677.1 80.8% 80.7% 1_456del;2908_2909ins225
12 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_017018681.1 78.5% 78.5% 0_1ins663
13 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XM_024448794.1 78.5% 78.5% 0_1ins663
14 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XR_001748540.1 73.2% 1_682del;3254_3255ins26;3750_4163del
15 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XR_001748542.1 71.3% 1_682del;3254_3255ins104;3672_4085del
16 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XR_001748543.1 68.3% (many diffs)
17 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XR_001748544.1 67.1% (many diffs)
18 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XR_001748541.1 52.4% (many diffs)
19 human 10198 MPHOSPH9 M-phase phosphoprotein 9 XR_001748539.1 43.9% 1_710del;3804_7032del
20 human 10198 MPHOSPH9 M-phase phosphoprotein 9 NR_103517.2 42.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3162
ORF length:
3093
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcaAAAT GGGTTTTTTT TCTCTAAGCA GTGAGAGAAA TGAATCTGTT ATCCATTATC
121CTGAATCCAC AGAACCTGAA ATACAGCAAG AAATGTCCAC GTCACAACCA GACTGCAATG
181TGGATAGTTG CTCAGTAAGC AGTGGATATG GCACCTTTTG TATCTCAGAA TTAAATCTGT
241ACAAATCTAA AGACCCTAAG GAGTTCATGG AGCACATAGA TGTTCCCAAA GGACAGTATG
301TAGCACCTGC GGTGCCGGCT GAGTCACTTG TAGATGGTGT GAAAAATGAG AATTTTTATA
361TACAGACTCC TGAAGAGTGT CATGTGTCTT TAAAGGAAGA TGTATCCATT TCTCCTGGTG
421AATTTGAACA TAATTTTCTT GGTGAAAATA AGGTTTCTGA AGTATACAGT GGGAAAACAA
481ATAGTAATGC TATAACATCA TGGGCACAAA AACTGAAGCA GAACCAACCA AAGAGAGCAC
541ATGTAGAAGA TGGAGGTTCA AGATCTAAAC AAGGAAATGA GCAAAGTAAG AAGACACCAA
601TTGAGAAATC TGATTTTGCT GCTGCTACAC ATCCTCGTGC TTTTTACCTC AGTAAACCAG
661ATGAAACTCC AAATGCTTGG ATGTCTGATT CAGGAACAGG ATTGACTTAC TGGAAACTAG
721AGGAAAAGGA TATGCACCAC TCTTTGCCTG AAACTTTAGA GAAGACGTTC ATATCATTGT
781CTTCCACAGA TGTGTCACCA AACCAGTCTA ATACTAGTAA TGAGATGAAG CTACCGTCAC
841TGAAGGATAT TTATTATAAA AAACAAAGGG AAAACAAGCA GTTACCTGAG AGGAATCTCA
901CTTCTGCTTC CAACCCAAAT CATCCACCAG AGGTCCTGAC TCTAGATCCT ACGTTACACA
961TGAAGCCAAA GCAGCAGATT TCAGGGATTC AACCTCACGG CCTTCCGAAT GCCCTTGATG
1021ACAGAATATC CTTTTCCCCG GACTCTGTTC TAGAGCCTAG TATGTCTAGT CCCTCTGACA
1081TAGACTCATT TTCACAAGCA AGTAATGTCA CTTCTCAGTT ACCTGGATTT CCAAAATATC
1141CCTCACACAC AAAAGCTTCT CCGGTGGACT CTTGGAAAAA TCAGACATTC CAAAACGAAA
1201GTAGGACCAG TTCCACGTTT CCGTCAGTAT ATACCATTAC TAGTAATGAT ATCTCGGTCA
1261ACACTGTAGA TGAAGAAAAC ACTGTCATGG TTGCTTCGGC CTCAGTCAGT CAGTCCCAGC
1321TTCCAGGTAC AGCCAACAGT GTCCCAGAAT GCATTTCATT GACTTCCTTG GAAGATCCTG
1381TGATATTGTC TAAGATTAGG CAGAATCTGA AGGAAAAGCA TGCTCGACAC ATAGCAGATC
1441TTCGAGCTTA TTATGAATCA GAAATAAATA GTTTGAAACA GAAGCTGGAG GCAAAAGAAA
1501TCTCTGGAGT TGAAGATTGG AAGATAACCA ATCAAATTCT TGTAGACAGA TGTGGCCAAT
1561TAGATAGTGC TTTGCATGAA GCTACTAGTC GCGTGAGAAC ACTTGAAAAT AAGAATAACT
1621TACTGGAAAT TGAAGTGAAT GATTTGAGAG AACGCTTCAG TGCAGCCAGC AGTGCTTCCA
1681AAATTTTGCA GGAACGAATT GAAGAAATGA GAACAAGCAG TAAAGAAAAA GACAATACCA
1741TCATTCGACT AAAATCTAGA CTGCAAGATT TAGAAGAAGC ATTTGAGAAT GCTTACAAAC
1801TCTCAGATGA TAAAGAAGCT CAACTAAAAC AAGAGAACAA AATGTTTCAA GATCTTTTAG
1861GAGAGTATGA GTCCCTTGGA AAAGAACACA GGAGAGTAAA GGATGCATTA AATACAACTG
1921AGAACAAATT GCTTGATGCA TATACTCAGA TTTCTGATTT GAAAAGAATG ATTTCAAAAC
1981TTGAAGCTCA GGTCAAGCAA GTAGAACATG AAAATATGTT AAGCCTTCGT CATAATTCTA
2041GAATTCACGT GAGACCCTCG CGTGCCAACA CACTAGCAAC TTCAGACGTC AGCAGGCGGA
2101AATGGCTGAT TCCAGGTGCA GAGTATTCCA TCTTTACTGG CCAGCCTCTG GACACCCAGG
2161ACAGTAACGT GGATAACCAG CTGGAGGAAA CCTGTAGCCT AGGGCACCGT TCACCTCTGG
2221AAAAGGATTC TTCACCTGGA AGTTCATCAA CAAGCTTGTT GATAAAAAAG CAAAGAGAGA
2281CTTCAGACAC GCCGATCATG AGAGCTTTAA AAGAACTTGA TGAGGGAAAA ATATTTAAAA
2341ATTGGGGGAC ACAGACAGAG AAAGAGGACA CCTCAAATAT AAATCCTCGG CAAACTGAAA
2401CTTCAGTTAA TGCAAGTCGT TCTCCAGAAA AGTGTGCCCA ACAGAGACAA AAGAGACTTA
2461ATTCGGCCTC ACAGAGATCA TCATCTTTAC CACCTTCAAA TCGTAAATCA AGTACTCCAA
2521CAAAAAGAGA GATTATGCTA ACACCAGTGA CTGTGGCTTA TAGTCCAAAG CGATCCCCTA
2581AAGAAAACTT GTCCCCAGGA TTTAGTCATC TGCTTAGCAA AAATGAGAGC AGTCCAATTC
2641GATTTGATAT ACTTTTGGAT GATTTAGATA CTGTTCCTGT GTCTACATTA CAACGTACCA
2701ATCCAAGAAA GCAACTCCAG TTTCTTCCTC TAGATGACTC GGAAGAAAAA ACTTATTCTG
2761AGAAAGCCAC CGATAACCAT GTTAATCATA GCTCTTGCCC TGAACCGGTG CCAAATGGAG
2821TGAAGAAAGT ATCTGTGAGA ACAGCCTGGG AGAAGAATAA ATCAGTTAGC TACGAACAGT
2881GTAAGCCGGT TTCAGTCACT CCACAGGGGA ATGATTTTGA ATATACAGCA AAAATTCGGA
2941CCCTAGCTGA AACAGAACGA TTTTTTGATG AACTTACAAA AGAAAAGGAC CAGATTGAGG
3001CAGCACTAAG CAGGATGCCT TCTCCTGGAG GACGAATCAC TTTACAGACA AGATTAAATC
3061AGGAAGCCTT GGAAGATCGT TTGGAAAGGA TTAATCGAGA ACTGGGTTCA GTTCGCATGA
3121CGCTAAAGAA ATTCCATGTT TTGCGCACCT CTGCAAATCT TTTGCCAACT TTCTTGTACA
3181AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)

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