Construct: ORF ccsbBroadEn_02441

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016385.1_s300c1, BRDN0000387089
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TAB1 (10454)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10454 TAB1 TGF-beta activated kinase 1... NM_006116.3 100% 100%
2 human 10454 TAB1 TGF-beta activated kinase 1... NM_153497.3 88.5% 85.5% (many diffs)
3 mouse 66513 Tab1 TGF-beta activated kinase 1... NM_025609.2 88.3% 97.2% (many diffs)
4 mouse 66513 Tab1 TGF-beta activated kinase 1... XM_006521259.2 58.9% 65% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1578
ORF length:
1512
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGCGCAGAGG AGGAGCTTGC TGCAGAGTGA GCAGCAGCCA AGCTGGACAG
121ATGACCTGCC TCTCTGCCAC CTCTCTGGGG TTGGCTCAGC CTCCAACCGC AGCTACTCTG
181CTGATGGCAA GGGCACTGAG AGCCACCCGC CAGAGGACAG CTGGCTCAAG TTCAGGAGTG
241AGAACAACTG CTTCCTGTAT GGGGTCTTCA ACGGCTATGA TGGCAACCGA GTGACCAACT
301TCGTGGCCCA GCGGCTGTCC GCAGAGCTCC TGCTGGGCCA GCTGAATGCC GAGCACGCCG
361AGGCCGATGT GCGGCGTGTG CTGCTGCAGG CCTTCGATGT GGTGGAGAGG AGCTTCCTGG
421AGTCCATTGA CGACGCCTTG GCTGAGAAGG CAAGCCTCCA GTCGCAATTG CCAGAGGGAG
481TCCCTCAGCA CCAGCTGCCT CCTCAGTATC AGAAGATCCT TGAGAGACTC AAGACGTTAG
541AGAGGGAAAT TTCGGGAGGG GCCATGGCCG TTGTGGCGGT CCTTCTCAAC AACAAGCTCT
601ACGTCGCCAA TGTCGGTACA AACCGTGCAC TTTTATGCAA ATCGACAGTG GATGGGTTGC
661AGGTGACACA GCTGAACGTG GACCACACCA CAGAGAACGA GGATGAGCTC TTCCGTCTTT
721CGCAGCTGGG CTTGGATGCT GGAAAGATCA AGCAGGTGGG GATCATCTGT GGGCAGGAGA
781GCACCCGGCG GATCGGGGAT TACAAGGTTA AATATGGCTA CACGGACATT GACCTTCTCA
841GCGCTGCCAA GTCCAAACCA ATCATCGCAG AGCCAGAAAT CCATGGGGCA CAGCCGCTGG
901ATGGGGTGAC GGGCTTCTTG GTGCTGATGT CGGAGGGGTT GTACAAGGCC CTAGAGGCAG
961CCCATGGGCC TGGGCAGGCC AACCAGGAGA TTGCTGCGAT GATTGACACT GAGTTTGCCA
1021AGCAGACCTC CCTGGACGCA GTGGCCCAGG CCGTCGTGGA CCGGGTGAAG CGCATCCACA
1081GCGACACCTT CGCCAGTGGT GGGGAGCGTG CCAGGTTCTG CCCCCGGCAC GAGGACATGA
1141CCCTGCTAGT GAGGAACTTT GGCTACCCGC TGGGCGAAAT GAGCCAGCCC ACACCGAGCC
1201CAGCCCCAGC TGCAGGAGGA CGAGTGTACC CTGTGTCTGT GCCATACTCC AGCGCCCAGA
1261GCACCAGCAA GACCAGCGTG ACCCTCTCCC TTGTCATGCC CTCCCAGGGC CAGATGGTCA
1321ACGGGGCTCA CAGTGCTTCC ACCCTGGACG AAGCCACCCC CACCCTCACC AACCAAAGCC
1381CGACCTTAAC CCTGCAGTCC ACCAACACGC ACACGCAGAG CAGCAGCTCC AGCTCTGACG
1441GAGGCCTCTT CCGCTCCCGG CCCGCCCACT CGCTCCCGCC TGGCGAGGAC GGTCGTGTTG
1501AGCCCTATGT GGACTTTGCT GAGTTTTACC GCCTCTGGAG CGTGGACCAT GGCGAGCAGA
1561GCGTGGTGAC AGCACCGTAC CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
1621gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)

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