Construct: ORF ccsbBroadEn_02591

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003955.1_s300c1, BRDN0000393819
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC27A2 (11001)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11001 SLC27A2 solute carrier family 27 me... NM_001159629.1 100% 100%
2 human 11001 SLC27A2 solute carrier family 27 me... NM_003645.4 91.4% 91.4% 688_846del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1767
ORF length:
1701
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCT TTCCGCCATC TACACAGTCC TGGCGGGACT GCTGTTCCTG CCGCTCCTGG
121TGAACCTCTG CTGCCCATAC TTCTTCCAGG ACATAGGCTA CTTCTTGAAG GTGGCCGCCG
181TGGGCCGGAG GGTGCGCAGC TACGGGAAGC GGCGGCCGGC GCGCACCATC CTGCGGGCGT
241TCCTGGAGAA AGCGCGCCAG ACGCCACACA AGCCTTTTCT GCTCTTCCGC GACGAGACTC
301TCACCTACGC GCAGGTGGAC CGGCGCAGCA ATCAAGTGGC CCGGGCGCTG CACGACCACC
361TCGGCCTGCG CCAGGGAGAC TGCGTGGCGC TCCTTATGGG TAACGAGCCG GCCTACGTGT
421GGCTGTGGCT GGGGCTGGTG AAGCTGGGCT GTGCCATGGC GTGCCTCAAT TACAACATCC
481GCGCGAAGTC CCTGCTGCAC TGCTTCCAGT GCTGCGGGGC GAAGGTGCTG CTGGTGTCGC
541CAGAACTACA AGCAGCTGTC GAAGAGATAC TGCCAAGCCT TAAAAAAGAT GATGTGTCCA
601TCTATTATGT GAGCAGAACT TCTAACACAG ATGGGATTGA CTCTTTCCTG GACAAAGTGG
661ATGAAGTATC AACTGAACCT ATCCCAGAGT CATGGAGGTC TGAAGTCACT TTTTCCACTC
721CTGCCTTATA CATTTATACT TCTGGAACCA CAGGTGCTAC TCTTGCCTTG CGGACTAAAT
781TTTCAGCCAG CCAGTTTTGG GATGACTGCA GAAAATACAA CGTCACTGTC ATTCAGTATA
841TCGGTGAACT GCTTCGGTAT TTATGCAACT CACCACAGAA ACCAAATGAC CGTGATCATA
901AAGTGAGACT GGCACTGGGA AATGGCTTAC GAGGAGATGT GTGGAGACAA TTTGTCAAGA
961GATTTGGGGA CATATGCATC TATGAGTTCT ATGCTGCCAC TGAAGGCAAT ATTGGATTTA
1021TGAATTATGC GAGAAAAGTT GGTGCTGTTG GAAGAGTAAA CTACCTACAG AAAAAAATCA
1081TAACTTATGA CCTGATTAAA TATGATGTGG AGAAAGATGA ACCTGTCCGT GATGAAAATG
1141GATATTGCGT CAGAGTTCCC AAAGGTGAAG TTGGACTTCT GGTTTGCAAA ATCACACAAC
1201TTACACCATT TAATGGCTAT GCTGGAGCAA AGGCTCAGAC AGAGAAGAAA AAACTGAGAG
1261ATGTCTTTAA GAAAGGAGAC CTCTATTTCA ACAGTGGAGA TCTCTTAATG GTTGACCATG
1321AAAATTTCAT CTATTTCCAC GACAGAGTTG GAGATACATT CCGGTGGAAA GGGGAAAATG
1381TGGCCACCAC TGAAGTTGCT GATACAGTTG GACTGGTTGA TTTTGTCCAA GAAGTAAATG
1441TTTATGGAGT GCATGTGCCA GATCATGAGG GTCGCATTGG CATGGCCTCC ATCAAAATGA
1501AAGAAAACCA TGAATTTGAT GGAAAGAAAC TCTTTCAGCA CATTGCTGAT TACCTACCTA
1561GTTATGCAAG GCCCCGGTTT CTAAGAATAC AGGACACCAT TGAGATCACT GGAACTTTTA
1621AACACCGCAA AATGACCCTG GTGGAGGAGG GCTTTAACCC TGCTGTCATC AAAGATGCCT
1681TGTATTTCTT GGATGACACA GCAAAAATGT ATGTGCCTAT GACTGAGGAC ATCTATAATG
1741CCATAAGTGC TAAAACCCTG AAACTCTGCC CAACTTTCTT GTACAAAGTt ggcattataa
1801gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)