Construct: ORF ccsbBroadEn_02613

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014451.1_s300c1, BRDN0000393181
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
STMN2 (11075)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11075 STMN2 stathmin 2 NM_007029.4 100% 100%
2 human 11075 STMN2 stathmin 2 XM_005251142.2 97.2% 97.2% 0_1insATGGCTAAAACAGCA
3 human 11075 STMN2 stathmin 2 NM_001199214.2 86.4% 85.9% (many diffs)
4 mouse 20257 Stmn2 stathmin-like 2 NM_025285.2 92.7% 100% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
603
ORF length:
537
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TAAAACAGCA ATGGCCTACA AGGAAAAAAT GAAGGAGCTG TCCATGCTGT
121CACTGATCTG CTCTTGCTTT TACCCGGAAC CTCGCAACAT CAACATCTAT ACTTACGATG
181ATATGGAAGT GAAGCAAATC AACAAACGTG CCTCTGGCCA GGCTTTTGAG CTGATCTTGA
241AGCCACCATC TCCTATCTCA GAAGCCCCAC GAACTTTAGC TTCTCCAAAG AAGAAAGACC
301TGTCCCTGGA GGAGATCCAG AAGAAACTGG AGGCTGCAGA GGAAAGAAGA AAGTCTCAGG
361AGGCCCAGGT GCTGAAACAA TTGGCAGAGA AGAGGGAACA CGAGCGAGAA GTCCTTCAGA
421AGGCTTTGGA GGAGAACAAC AACTTCAGCA AGATGGCGGA GGAAAAGCTG ATCCTGAAAA
481TGGAACAAAT TAAGGAAAAC CGTGAGGCTA ATCTAGCTGC TATTATTGAA CGTCTGCAGG
541AAAAGGAGAG GCATGCTGCG GAGGTGCGCA GGAACAAGGA ACTCCAGGTT GAACTGTCTG
601GCTGCCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
661gcaacgaac

Download FASTA (ORF) (Full)