Construct: ORF ccsbBroadEn_03015

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014809.1_s300c1, BRDN0000397323
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CSDC2 (27254)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 27254 CSDC2 cold shock domain containin... NM_014460.4 100% 100%
2 mouse 105859 Csdc2 cold shock domain containin... NM_145473.3 88.3% 96.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
525
ORF length:
459
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC TTCAGAGTCG ACGTCACCCC CAGTTGTGCC CCCGCTCCAC TCCCCCAAGT
121CCCCAGTCTG GCCCACCTTC CCCTTCCACA GGGAGGGCAG CAGGGTCTGG GAGCGGGGTG
181GTGTCCCACC TCGGGACCTA CCCAGCCCTC TGCCCACCAA GCGGACCAGG ACCTATTCAG
241CGACAGCCCG GGCCTCAGCT GGCCCCGTGT TCAAGGGCGT CTGTAAGCAG TTCTCACGCT
301CACAGGGCCA TGGCTTCATC ACCCCCGAGA ACGGGTCCGA GGACATCTTC GTACATGTGT
361CTGACATCGA GGGGGAGTAC GTGCCAGTGG AGGGCGACGA GGTGACCTAC AAGATGTGCC
421CTATCCCTCC CAAGAACCAG AAGTTCCAGG CCGTGGAGGT GGTGCTCACT CAGCTGGCCC
481CCCACACTCC CCACGAGACG TGGTCTGGCC AGGTCGTGGG CTCCTACCCA ACTTTCTTGT
541ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)