Construct: ORF ccsbBroadEn_03064

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003479.1_s300c1, BRDN0000389059
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC43A3 (29015)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29015 SLC43A3 solute carrier family 43 me... NM_001278201.2 100% 100%
2 human 29015 SLC43A3 solute carrier family 43 me... NM_014096.4 100% 100%
3 human 29015 SLC43A3 solute carrier family 43 me... NM_017611.2 100% 100%
4 human 29015 SLC43A3 solute carrier family 43 me... NM_199329.3 100% 100%
5 human 29015 SLC43A3 solute carrier family 43 me... NM_001278206.2 97.4% 97.4% 184_222del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1539
ORF length:
1473
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGGCCAGGGC CTGCCCCTGC ACGTGGCCAC ACTGCTGACT GGGCTGCTGG
121AATGCCTGGG CTTTGCTGGC GTCCTCTTTG GCTGGCCTTC ACTAGTGTTT GTCTTCAAGA
181ATGAAGATTA CTTTAAGGAT CTGTGTGGAC CAGATGCTGG GCCGATTGGC AATGCCACAG
241GGCAGGCTGA CTGCAAAGCC CAGGATGAGA GGTTCTCACT CATCTTCACC CTGGGGTCCT
301TCATGAACAA CTTCATGACA TTCCCCACTG GCTACATCTT TGACCGGTTC AAGACCACCG
361TGGCACGCCT CATAGCCATA TTTTTCTACA CCACCGCCAC ACTCATCATA GCCTTCACCT
421CTGCAGGCTC AGCCGTGCTG CTCTTCCTGG CCATGCCAAT GCTCACCATT GGGGGAATCC
481TGTTTCTCAT CACCAACCTG CAGATTGGGA ACCTATTTGG CCAACACCGT TCGACCATCA
541TCACTCTGTA CAATGGAGCA TTTGACTCTT CCTCGGCAGT CTTCCTTATT ATTAAGCTTC
601TTTATGAAAA AGGCATCAGC CTCAGGGCCT CCTTCATCTT CATCTCTGTC TGCAGTACCT
661GGCATGTAGC ACGCACTTTC CTCCTGATGC CCCGGGGGCA CATCCCATAC CCACTGCCCC
721CCAACTACAG CTATGGCCTG TGCCCTGGGA ATGGCACCAC AAAGGAAGAG AAGGAAACAG
781CTGAGCATGA AAACAGGGAG CTACAGTCAA AGGAGTTCCT TTCAGCGAAG GAAGAGACCC
841CAGGGGCAGG GCAGAAGCAG GAACTCCGCT CCTTCTGGAG CTACGCTTTC TCTCGGCGCT
901TTGCCTGGCA CCTGGTGTGG CTGTCTGTGA TACAGTTGTG GCACTACCTC TTCATTGGCA
961CTCTCAACTC CTTGCTGACC AACATGGCCG GTGGGGACAT GGCACGAGTC AGCACCTACA
1021CAAATGCCTT TGCCTTCACT CAGTTCGGAG TGCTGTGTGC CCCCTGGAAT GGCCTGCTCA
1081TGGACCGGCT TAAACAGAAG TACCAGAAGG AAGCAAGAAA GACAGGTTCC TCCACTTTGG
1141CGGTGGCCCT CTGCTCGACG GTGCCTTCGC TGGCCCTGAC ATCCCTGCTG TGCCTGGGCT
1201TCGCCCTCTG TGCCTCAGTC CCCATCCTCC CTCTCCAGTA CCTCACCTTC ATCCTGCAAG
1261TGATCAGCCG CTCCTTCCTC TATGGGAGCA ACGCGGCCTT CCTCACCCTT GCTTTCCCTT
1321CAGAGCACTT TGGCAAGCTC TTTGGGCTGG TGATGGCCTT GTCGGCTGTG GTGTCTCTGC
1381TCCAGTTCCC CATCTTCACC CTCATCAAAG GCTCCCTTCA GAATGACCCA TTTTACGTGA
1441ATGTGATGTT CATGCTTGCC ATTCTTCTGA CATTCTTCCA CCCCTTTCTG GTATATCGGG
1501AATGCCGTAC TTGGAAAGAA AGTCCCTCTG CAATTGCATA CCCAACTTTC TTGTACAAAG
1561Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)