Construct: ORF ccsbBroadEn_03381

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014542.1_s300c1, BRDN0000389250
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
INPP5K (51763)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51763 INPP5K inositol polyphosphate-5-ph... NM_016532.4 100% 100%
2 human 51763 INPP5K inositol polyphosphate-5-ph... NM_001135642.2 83% 83% 0_1ins228
3 human 51763 INPP5K inositol polyphosphate-5-ph... NM_130766.3 83% 83% 0_1ins228
4 human 51763 INPP5K inositol polyphosphate-5-ph... XM_005256683.2 83% 83% 0_1ins228
5 human 51763 INPP5K inositol polyphosphate-5-ph... XM_011523934.1 83% 83% 0_1ins228
6 human 51763 INPP5K inositol polyphosphate-5-ph... XM_017024756.1 83% 83% 0_1ins228
7 human 51763 INPP5K inositol polyphosphate-5-ph... XM_024450802.1 83% 83% 0_1ins228
8 human 51763 INPP5K inositol polyphosphate-5-ph... XM_005256685.1 79.4% 79.4% 0_1ins276
9 human 51763 INPP5K inositol polyphosphate-5-ph... XM_005256686.2 79.4% 79.4% 0_1ins276
10 human 51763 INPP5K inositol polyphosphate-5-ph... XM_017024757.2 79.4% 79.4% 0_1ins276
11 human 51763 INPP5K inositol polyphosphate-5-ph... XM_011523936.2 68.6% 60.9% 0_1ins415;140_149delGTGAGCCTGG
12 human 51763 INPP5K inositol polyphosphate-5-ph... XM_017024758.2 68.6% 60.9% 0_1ins415;140_149delGTGAGCCTGG
13 human 51763 INPP5K inositol polyphosphate-5-ph... XM_017024759.1 68.6% 60.9% 0_1ins415;140_149delGTGAGCCTGG
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1410
ORF length:
1344
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG CTCGCGGAAG CTGAGCGGGC CGAAAGGCAG GAGGCTCAGC ATACACGTCG
121TGACTTGGAA CGTGGCTTCG GCAGCGCCCC CTCTAGATCT CAGTGACCTG CTTCAGCTGA
181ACAACCGGAA CCTCAATCTT GACATATATG TTATTGGTTT GCAGGAATTG AACTCTGGGA
241TCATAAGCCT CCTTTCCGAT GCTGCCTTTA ATGACTCGTG GAGCAGTTTC CTCATGGATG
301TGCTTTCCCC TCTGAGCTTC ATCAAGGTCT CCCATGTCCG TATGCAGGGG ATCCTCTTAC
361TGGTCTTTGC CAAGTATCAG CATTTGCCCT ATATCCAGAT TCTGTCTACT AAATCCACCC
421CCACTGGCCT GTTTGGGTAC TGGGGGAACA AAGGTGGAGT CAACATCTGC CTGAAGCTTT
481ATGGCTACTA TGTCAGCATC ATCAACTGCC ACCTGCCTCC CCACATTTCC AACAATTACC
541AGCGGCTGGA GCACTTTGAC CGGATCCTGG AGATGCAGAA TTGTGAGGGG CGAGACATCC
601CAAACATCCT GGACCACGAC CTCATTATCT GGTTTGGAGA CATGAACTTT CGGATCGAGG
661ACTTTGGGTT GCACTTTGTT CGGGAATCCA TTAAAAATCG GTGCTACGGT GGCCTGTGGG
721AGAAGGACCA GCTCAGCATT GCCAAGAAAC ATGACCCGCT GCTCCGGGAG TTCCAGGAGG
781GCCGCCTACT CTTCCCGCCC ACCTACAAGT TTGATAGGAA CTCCAACGAC TATGACACCA
841GTGAGAAAAA ACGCAAGCCT GCATGGACCG ATCGCATCCT GTGGAGGCTG AAGCGGCAGC
901CCTGTGCTGG CCCCGACACT CCCATACCGC CGGCGTCACA CTTCTCCTTG TCTCTGAGGG
961GCTACAGCAG CCACATGACG TACGGCATCA GCGACCACAA GCCTGTCTCC GGCACGTTCG
1021ACTTGGAGCT GAAGCCATTG GTGTCTGCTC CGCTGATCGT CCTGATGCCC GAGGACCTGT
1081GGACCGTGGA AAATGACATG ATGGTCAGCT ACTCTTCAAC CTCGGACTTC CCCAGCAGCC
1141CGTGGGACTG GATTGGACTG TACAAGGTGG GGCTGCGGGA CGTTAATGAC TACGTGTCCT
1201ATGCCTGGGT CGGGGACAGC AAGGTCTCCT GCAGCGACAA CCTGAACCAG GTTTACATCG
1261ACATCAGCAA TATCCCTACC ACTGAAGATG AGTTTCTCCT CTGTTACTAC AGCAACAGTC
1321TGCGTTCTGT GGTGGGGATA AGCAGACCCT TCCAGATCCC GCCTGGCTCC TTGAGGGAGG
1381ACCCACTGGG TGAAGCACAG CCACAGATCT GCCCAACTTT CTTGTACAAA GTtggcatta
1441taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)