Construct: ORF ccsbBroadEn_03485

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010212.1_s300c1, BRDN0000455999
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IMPAD1 (54928)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54928 IMPAD1 inositol monophosphatase do... NM_017813.5 100% 100%
2 human 54928 IMPAD1 inositol monophosphatase do... XR_928786.2 14.6% 1_289del;936_1044del;1476_7340del
3 mouse 242291 Impad1 inositol monophosphatase do... NM_177730.3 89.1% 91% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1143
ORF length:
1077
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CCCCATGGGC ATCCGCCTTT CCCCACTGGG GGTGGCAGTG TTTTGCCTGC
121TGGGGCTCGG CGTGCTCTAC CACCTCTACT CGGGCTTCTT GGCCGGCCGC TTCAGCCTCT
181TCGGCCTGGG CGGCGAGCCT GGCGGCGGCG CGGCGGGGCC CGCGGCCGCG GCCGATGGGG
241GCACCGTGGA CTTGCGCGAG ATGCTGGCTG TGTCAGTGCT GGCCGCAGTC CGCGGCGGCG
301ACGAGGTGAG GCGCGTCCGC GAGAGCAACG TCCTCCACGA GAAGTCCAAG GGGAAGACGC
361GCGAGGGAGC CGAGGACAAG ATGACCAGCG GCGACGTGCT GTCCAACCGC AAGATGTTCT
421ACCTGCTCAA GACCGCCTTC CCCAGCGTCC AGATTAATAC TGAGGAACAC GTGGATGCAG
481CTGATCAGGA GGTTATCTTG TGGGATCATA AGATTCCTGA GGATATCCTA AAGGAAGTAA
541CTACTCCTAA AGAGGTACCA GCAGAAAGTG TTACTGTCTG GATTGACCCA CTTGATGCTA
601CACAGGAATA TACAGAGGAT CTTCGAAAGT ACGTCACTAC TATGGTGTGT GTGGCTGTAA
661ATGGTAAACC CATGCTAGGA GTTATACATA AGCCATTTTC CGAATATACA GCTTGGGCAA
721TGGTAGATGG TGGTTCAAAT GTGAAAGCCC GCTCTTCCTA CAATGAGAAG ACCCCAAGGA
781TCGTTGTGTC TCGTTCCCAT TCAGGGATGG TCAAACAGGT CGCTCTTCAG ACTTTTGGAA
841ACCAGACTAC AATTATCCCA GCTGGTGGTG CTGGTTATAA AGTTTTAGCA CTTTTGGATG
901TGCCTGATAA GAGTCAAGAA AAAGCTGATT TATACATCCA TGTGACATAC ATCAAAAAGT
961GGGATATATG TGCTGGTAAT GCCATCTTAA AAGCCCTAGG GGGGCATATG ACTACCCTGA
1021GTGGTGAAGA AATCAGTTAC ACTGGTTCAG ACGGCATTGA AGGGGGACTC CTTGCTAGCA
1081TCAGAATGAA CCACCAGGCC CTGGTCAGAA AACTCCCAGA TCTAGAAAAG ACAGGACATA
1141AATGCCCAAC TTTCTTGTAC AAAGTTGGca ttataagaaa gcattgctta tcaatttgtt
1201gcaacgaac

Download FASTA (ORF) (Full)

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