Construct: ORF ccsbBroadEn_03638

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005582.1_s300c1, BRDN0000387900
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
IQCC (55721)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55721 IQCC IQ motif containing C NM_018134.3 100% 100%
2 human 55721 IQCC IQ motif containing C NM_001160042.2 85.3% 85.3% 41_280del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1467
ORF length:
1398
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAGCCAGAG CTGCTGGTTC GGAAGGTGTC TGCATTGCAG GCCTGCGTCC
121GGGGCTTCTT GGTCCGACGC CAGTTCCAGA GCCTGCGAGC TGAGTATGAG GCGATTGTAC
181GAGAGGTCGA GGGCGACCTG GGCACGCTTC AGTGGACCGA GGGCCGCATT CCCAGGCCGC
241GATTCCTCCC AGAGAAGGCA AAATCCCATC AGACCTGGAA AGCAGGAGAC AGGGTAGCAA
301ATCCAGAGCA GGGGCTGTGG AACCACTTCC CATGTGAAGA GTCTGAGGGA GAGGCCACCT
361GGGAGGAGAT GGTGCTGAAG AAGTCAGGAG AGAGCTCAGC AAATCAAGGA AGCCTCTGCA
421GAGATCACAG CTCCTGGCTT CAGATGAAGC AGAACAGGAA ACCCAGCCAA GAGAAGACCA
481GAGACACGAC AAGGATGGAG AATCCAGAAG CCACAGATCA AAGACTGCCC CACAGCCAAC
541CTCAGCTTCA AGAGCTTCAG TACCACCGCA GCCACTTGGC CATGGAATTG CTGTGGCTGC
601AACAGGCCAT CAATAGCCGT AAGGAGTACC TACTTCTTAA ACAAACACTG AGATCCCCAG
661AGGCGGGCCC GATCAGAGAG GAACCCCGCG TGTTCCTAGA ACATGGGGAA CAGGCCTGTG
721AGAGGGACCA GTCACAACCA AGCGCACCAC TGGAGGACCA GTCCTACAGA GACAGGACCA
781CTGGAGAGCT AGAACAGGAG GATGACTCCT GTCACAGGGT CAAATCACCC CACAGATCCC
841CAGGAAGTTT GGCCACTACA CAAAAAAACA TTGCTGGGGC TAAGTGCAGA GAACCATGCT
901ACAGCAAGTC TGGACCACCG TCGTCTATAC CATCAAACAG CCAGGCCTTG GGGGACAGGC
961TCACCAAAGG GCCAGACGAT GGAAGACAGA CCTTTGGAGG GACCTGCCTG CTGCAGATGA
1021AAATCCTGGA GGACCAGACC CCCAGAGGTT TAAAACCTAG GAACCATTGT CCCAGGAAGT
1081CCAGGACACA GCTGTCTGCA CTCTATGAGG ACTCAAATAT TAAGGAGATG TCTCCCAGAA
1141AACTAGACCA CAAAGAGCCT GACTGCCGAA CAGTCAGGAC ACAAGAGTTG GGCCTCTCAG
1201AGGACCACAT CATCTGGGAT GGTACCTTGG GGGGGCCAGA GCATAGTGTC CTCGATCTCT
1261GGAGGACTAA ACCACCCAAA GGCCAGGCCC CCACTGATAG AAGCTCCAGA GATGGAACCT
1321CCAATGAGCC TAGTCATGAA GGACAGAAAA AGCAGAGGAC TATACCATGG AGATCAAAGT
1381CACCTGAGAT TCTGTCTTCT ACAAAGGCAG GCTGTACAGG AGAGGAACAG TGGAGGGGCA
1441GGCCATGGAA AACAGAACCA CCTGGCTTGC CAACTTTCTT GTACAAAGTt ggcattataa
1501gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)