Construct: ORF ccsbBroadEn_04205

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014046.1_s300c1, BRDN0000394795
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KLHL15 (80311)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80311 KLHL15 kelch like family member 15 NM_030624.3 100% 100%
2 mouse 236904 Klhl15 kelch-like 15 NM_001039061.1 90.8% 99.3% (many diffs)
3 mouse 236904 Klhl15 kelch-like 15 XM_006527986.3 90.8% 99.3% (many diffs)
4 mouse 236904 Klhl15 kelch-like 15 XM_006527987.2 90.8% 99.3% (many diffs)
5 mouse 236904 Klhl15 kelch-like 15 XM_006527988.3 90.8% 99.3% (many diffs)
6 mouse 236904 Klhl15 kelch-like 15 XM_006527989.3 90.8% 99.3% (many diffs)
7 mouse 236904 Klhl15 kelch-like 15 XM_006527990.3 90.8% 99.3% (many diffs)
8 mouse 236904 Klhl15 kelch-like 15 XM_011247581.1 90.8% 99.3% (many diffs)
9 mouse 236904 Klhl15 kelch-like 15 NM_001039060.1 37.1% 39.2% (many diffs)
10 mouse 236904 Klhl15 kelch-like 15 NM_001039059.1 35.8% 38.5% (many diffs)
11 mouse 236904 Klhl15 kelch-like 15 NM_153165.2 35.8% 38.5% (many diffs)
12 mouse 236904 Klhl15 kelch-like 15 XM_006527991.3 35.8% 38.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1881
ORF length:
1812
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCAGGGGAC GTGGAAGGAT TCTGTTCCTC CATCCACGAC ACCAGTGTCT
121CTGCTGGGTT CAGAGCACTG TATGAGGAGG GATTGCTTCT TGATGTCACT CTGGTTATTG
181AAGATCATCA GTTCCAGGCC CATAAAGCAC TCTTGGCCAC CCAGAGTGAT TACTTCAGAA
241TTATGTTTAC TGCAGACATG AGGGAACGAG ATCAGGACAA AATTCATTTA AAAGGTCTAA
301CAGCTACCGG TTTCAGCCAT GTCCTGCAAT TTATGTACTA TGGAACTATA GAGCTGAGTA
361TGAATACCGT TCATGAGATT CTTCAGGCTG CCATGTATGT TCAACTTATA GAAGTGGTGA
421AGTTCTGCTG CTCTTTTCTC TTAGCGAAGA TCTGCCTAGA AAATTGTGCA GAAATTATGA
481GACTCTTAGA TGATTTCGGC GTAAACATCG AGGGAGTCAG GGAGAAGTTA GACACCTTTC
541TGCTAGACAA CTTTGTGCCA CTCATGTCTA GGCCTGACTT TCTGTCCTAT CTGAGCTTTG
601AGAAGCTCAT GTCTTACTTG GATAATGATC ATCTGAGCAG GTTCCCAGAG ATAGAGCTGT
661ACGAGGCTGT GCAGTCTTGG CTGCGGCATG ATAGAAGACG CTGGAGACAT ACCGATACCA
721TCATTCAGAA TATCCGGTTT TGCTTGATGA CCCCAACCAG CGTTTTTGAG AAGGTTAAGA
781CATCAGAATT TTATAGATAC TCCCGACAGC TCCGTTACGA AGTTGACCAA GCATTGAATT
841ACTTTCAGAA TGTTCACCAG CAGCCTTTGT TGGATATGAA GTCAAGCCGC ATCCGTTCTG
901CAAAACCGCA AACTACAGTA TTTCGAGGAA TGATTGGACA TAGCATGGTT AACAGTAAAA
961TACTTCTCTT AAAGAAACCA AGAGTCTGGT GGGAGCTAGA AGGCCCACAA GTACCTCTGC
1021GACCTGACTG CCTTGCTATC GTCAATAATT TTGTGTTCCT GTTAGGCGGG GAAGAGCTGG
1081GCCCGGATGG TGAATTCCAT GCTTCTTCCA AAGTATTCAG GTATGACCCG AGACAGAACT
1141CCTGGCTGCA GATGGCAGAT ATGTCTGTAC CACGCTCTGA ATTTGCTGTA GGTGTTATTG
1201GGAAGTTTAT TTACGCCGTA GCAGGCAGAA CCAGAGATGA GACTTTCTAT TCAACTGAGA
1261GATATGACAT CACCAACGAT AAATGGGAAT TTGTGGATCC TTATCCAGTT AACAAATATG
1321GACATGAGGG GACAGTGCTC AATAACAAAT TGTTTATCAC CGGTGGAATC ACCTCATCTT
1381CCACCTCCAA GCAAGTGTGC GTGTTTGACC CCAGCAAAGA AGGGACCATA GAACAACGGA
1441CCAGGAGAAC TCAAGTGGTT ACCAACTGTT GGGAGAATAA GAGCAAGATG AATTACGCGA
1501GATGCTTTCA CAAGATGATT TCTTACAATG GCAAGCTTTA TGTCTTCGGT GGTGTCTGTG
1561TGATCTTGAG GGCCTCTTTC GAATCTCAGG GATGCCCTTC TACAGAAGTA TACAACCCAG
1621AGACTGATCA GTGGACCATC TTGGCATCCA TGCCGATTGG TAGAAGTGGC CATGGTGTGA
1681CTGTGCTGGA CAAACAAATA ATGGTTCTTG GAGGCCTTTG TTATAATGGT CATTACAGCG
1741ATTCCATCCT CACTTTTGAT CCGGATGAAA ACAAGTGGAA GGAAGATGAG TACCCTCGGA
1801TGCCCTGCAA GCTGGATGGT TTACAAGTAT GCAACCTGCA TTTTCCGGAC TATGTACTGG
1861ATGAGGTCAG GCGTTGCAAC TTGCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
1921attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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