Construct: ORF ccsbBroadEn_04359

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010915.1_s300c1, BRDN0000397850
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ING5 (84289)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84289 ING5 inhibitor of growth family ... NM_032329.6 100% 100%
2 human 84289 ING5 inhibitor of growth family ... NM_001330162.2 94.1% 94.1% 678_679ins42
3 human 84289 ING5 inhibitor of growth family ... XM_017005102.2 78.2% 71.6% (many diffs)
4 human 84289 ING5 inhibitor of growth family ... XM_017005097.1 78.1% 75.6% (many diffs)
5 human 84289 ING5 inhibitor of growth family ... XM_017005101.1 75.3% 66.5% (many diffs)
6 human 84289 ING5 inhibitor of growth family ... XM_017005098.1 73.4% 71% (many diffs)
7 human 84289 ING5 inhibitor of growth family ... XM_017005099.1 73.4% 71% (many diffs)
8 human 84289 ING5 inhibitor of growth family ... NM_001330161.2 72.8% 57.5% (many diffs)
9 human 84289 ING5 inhibitor of growth family ... XR_002959351.1 12.4% (many diffs)
10 human 84289 ING5 inhibitor of growth family ... XR_427115.4 10.6% 1_20del;502_2086del;2326_6778del
11 human 84289 ING5 inhibitor of growth family ... XR_001738993.2 9.4% (many diffs)
12 mouse 66262 Ing5 inhibitor of growth family,... NM_025454.2 88.4% 94.5% (many diffs)
13 mouse 66262 Ing5 inhibitor of growth family,... XM_006529792.3 88% 93.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
786
ORF length:
720
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GACCGCCATG TACTTGGAGC ACTATCTGGA CAGTATCGAG AACCTTCCCT
121GCGAACTTCA GAGGAACTTC CAGCTGATGC GAGAGCTGGA CCAGAGGACG GAAGATAAGA
181AAGCAGAGAT TGACATCCTG GCTGCAGAGT ACATCTCCAC GGTGAAGACG CTGTCTCCAG
241ACCAGCGCGT GGAGCGCCTG CAGAAGATCC AGAACGCCTA CAGCAAGTGC AAGGAATACA
301GTGACGACAA AGTGCAGCTG GCCATGCAGA CCTACGAGAT GGTGGATAAA CACATTCGAA
361GGCTTGATGC AGACCTGGCG CGCTTTGAAG CAGATCTGAA GGACAAGATG GAGGGCAGTG
421ATTTTGAAAG CTCCGGAGGG CGAGGGTTAA AAAAAGGCCG GGGTCAGAAA GAAAAAAGAG
481GGTCCCGGGG CCGAGGCAGG AGGACATCAG AGGAAGACAC ACCAAAGAAA AAGAAGCACA
541AAGGAGGGTC TGAGTTCACT GACACCATCC TGTCCGTGCA CCCCTCTGAT GTGCTGGACA
601TGCCCGTGGA CCCAAACGAA CCCACGTACT GCCTGTGCCA CCAGGTCTCC TATGGGGAGA
661TGATTGGCTG TGACAATCCA GACTGTCCAA TTGAGTGGTT TCACTTTGCC TGCGTGGACC
721TTACCACGAA ACCCAAAGGA AAATGGTTCT GTCCACGGTG TGTCCAGGAA AAGAGGAAGA
781AGAAGTACCC AACTTTCTTG TACAAAGTtg gcattataag aaagcattgc ttatcaattt
841gttgcaacga ac

Download FASTA (ORF) (Full)