Construct: ORF ccsbBroadEn_04361

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013239.1_s300c1, BRDN0000392417
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WDR83 (84292)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84292 WDR83 WD repeat domain 83 NM_001099737.3 100% 100%
2 human 84292 WDR83 WD repeat domain 83 NM_032332.4 100% 100%
3 human 84292 WDR83 WD repeat domain 83 NR_029375.2 64% 1_342del;548_549insGGTGCTGGATGCGGCCG;1271_1433del
4 mouse 67836 Wdr83 WD repeat domain containing 83 NM_026399.2 88% 93.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1011
ORF length:
945
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TTTCCCTGAG CCAAAGCCGC GGCCTCCAGA GCTGCCGCAG AAACGGTTGA
121AGACGCTGGA CTGCGGGCAG GGGGCAGTGC GAGCCGTACG ATTTAATGTG GATGGCAATT
181ACTGCCTGAC GTGCGGCAGT GACAAGACGC TGAAGCTGTG GAACCCGCTT CGGGGGACGC
241TGCTGCGGAC GTACAGCGGC CACGGCTACG AGGTGCTGGA TGCGGCCGGC TCCTTTGACA
301ACAGTAGTCT CTGCTCCGGC GGCGGGGACA AGGCGGTGGT TCTGTGGGAT GTGGCATCAG
361GGCAGGTCGT GCGCAAATTC CGGGGCCACG CAGGGAAGGT GAACACGGTG CAGTTTAATG
421AAGAGGCCAC AGTTATCCTG TCCGGCTCTA TTGATTCCAG TATCCGCTGT TGGGATTGCC
481GCTCACGGAG GCCTGAGCCA GTGCAGACGC TGGATGAGGC CAGAGATGGC GTGTCCAGTG
541TGAAGGTGTC AGACCACGAG ATCCTGGCAG GCTCCGTGGA TGGCCGCGTG AGACGCTATG
601ACCTAAGGAT GGGGCAGCTC TTCTCAGACT ACGTGGGCAG CCCCATCACC TGCACCTGCT
661TCAGCCGGGA TGGGCAGTGC ACCCTGGTGT CCAGCCTGGA CTCCACATTG CGGCTCCTGG
721ACAAAGACAC AGGGGAGCTG CTGGGCGAGT ACAAGGGCCA TAAGAACCAG GAATACAAGC
781TGGACTGCTG CCTGAGCGAG CGTGACACAC ATGTGGTCAG CTGTTCTGAG GACGGGAAGG
841TGTTCTTCTG GGACCTGGTG GAGGGTGCGC TGGCTCTGGC CCTGCCTGTG GGTTCCGGTG
901TGGTGCAGTC GCTGGCCTAC CACCCAACAG AGCCCTGCCT GCTGACCGCC ATGGGAGGCA
961GCGTCCAGTG CTGGCGAGAG GAGGCCTATG AGGCAGAGGA TGGAGCAGGC TGCCCAACTT
1021TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)