Construct: ORF ccsbBroadEn_05141

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013531.1_s300c1, BRDN0000398304
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UGT3A2 (167127)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 167127 UGT3A2 UDP glycosyltransferase fam... NM_174914.4 100% 100%
2 human 167127 UGT3A2 UDP glycosyltransferase fam... XM_011513988.2 95% 95% 195_275del
3 human 167127 UGT3A2 UDP glycosyltransferase fam... NM_001168316.2 93.4% 93.4% 92_93ins102
4 human 167127 UGT3A2 UDP glycosyltransferase fam... XM_017009150.1 92.7% 92.7% 0_1ins114
5 human 133688 UGT3A1 UDP glycosyltransferase fam... NM_152404.4 85.8% 78.8% (many diffs)
6 human 133688 UGT3A1 UDP glycosyltransferase fam... XM_011513958.2 80.8% 73.8% (many diffs)
7 human 133688 UGT3A1 UDP glycosyltransferase fam... XM_005248243.4 76.5% 69.2% (many diffs)
8 human 133688 UGT3A1 UDP glycosyltransferase fam... XM_011513959.2 76.5% 69.2% (many diffs)
9 human 167127 UGT3A2 UDP glycosyltransferase fam... NR_031764.2 44.2% 1_93del;404_405ins532;1131_1810del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1638
ORF length:
1569
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCTGGGCAG CGAGTGCTTC TTCTAGTGGG CTTCCTTCTC CCTGGGGTCC
121TGCTCTCAGA GGCTGCCAAA ATCCTGACAA TATCTACAGT AGGTGGAAGC CATTATCTAC
181TGATGGACCG GGTTTCTCAG ATTCTTCAAG ATCACGGTCA TAATGTCACC ATGCTTAACC
241ACAAAAGAGG TCCTTTTATG CCAGATTTTA AAAAGGAAGA AAAATCATAT CAAGTTATCA
301GTTGGCTTGC ACCTGAAGAT CATCAAAGAG AATTTAAAAA GAGTTTTGAT TTCTTTCTGG
361AAGAAACTTT AGGTGGCAGA GGAAAATTTG AAAACTTATT AAATGTTCTA GAATACTTGG
421CGTTGCAGTG CAGTCATTTT TTAAATAGAA AGGATATCAT GGATTCCTTA AAGAATGAGA
481ACTTCGACAT GGTGATAGTT GAAACTTTTG ACTACTGTCC TTTCCTGATT GCTGAGAAGC
541TTGGGAAGCC ATTTGTGGCC ATTCTTTCCA CTTCATTCGG CTCTTTGGAA TTTGGGCTAC
601CAATCCCCTT GTCTTATGTT CCAGTATTCC GTTCCTTGCT GACTGATCAC ATGGACTTCT
661GGGGCCGAGT GAAGAATTTT CTGATGTTCT TTAGTTTCTG CAGGAGGCAA CAGCACATGC
721AGTCTACATT TGACAACACC ATCAAGGAAC ATTTCACAGA AGGCTCTAGG CCAGTTTTGT
781CTCATCTTCT ACTGAAAGCA GAGTTGTGGT TCATTAACTC TGACTTTGCC TTTGATTTTG
841CTCGACCTCT GCTTCCCAAC ACTGTTTATG TTGGAGGCTT GATGGAAAAA CCTATTAAAC
901CAGTACCACA AGACTTGGAG AACTTCATTG CCAAGTTTGG GGACTCTGGT TTTGTCCTTG
961TGACCTTGGG CTCCATGGTG AACACCTGTC AGAATCCGGA AATCTTCAAG GAGATGAACA
1021ATGCCTTTGC TCACCTACCC CAAGGGGTGA TATGGAAGTG TCAGTGTTCT CATTGGCCCA
1081AAGATGTCCA CCTGGCTGCA AATGTGAAAA TTGTGGACTG GCTTCCTCAG AGTGACCTCC
1141TGGCTCACCC AAGCATCCGT CTGTTTGTCA CCCACGGCGG GCAGAATAGC ATAATGGAGG
1201CCATCCAGCA TGGTGTGCCC ATGGTGGGGA TCCCTCTCTT TGGAGACCAG CCTGAAAACA
1261TGGTCCGAGT AGAAGCCAAA AAGTTTGGTG TTTCTATTCA GTTAAAGAAG CTCAAGGCAG
1321AGACATTGGC TCTTAAGATG AAACAAATCA TGGAAGACAA GAGATACAAG TCCGCGGCAG
1381TGGCTGCCAG TGTCATCCTG CGCTCCCACC CGCTCAGCCC CACACAGCGG CTGGTGGGCT
1441GGATTGACCA CGTCCTCCAG ACAGGGGGCG CGACGCACCT CAAGCCCTAT GTCTTTCAGC
1501AGCCCTGGCA TGAGCAGTAC CTGCTCGACG TTTTTGTGTT TCTGCTGGGG CTCACTCTGG
1561GGACTCTATG GCTTTGTGGG AAGCTGCTGG GCATGGCTGT CTGGTGGCTG CGTGGGGCCA
1621GAAAGGTGAA GGAGACATTG CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
1681gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)