Construct: ORF ccsbBroadEn_05281

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008203.1_s300c1, BRDN0000456199
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ATP6V0D2 (245972)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 245972 ATP6V0D2 ATPase H+ transporting V0 s... NM_152565.1 100% 100%
2 mouse 242341 Atp6v0d2 ATPase, H+ transporting, ly... NM_175406.3 87.7% 93.1% (many diffs)
3 mouse 242341 Atp6v0d2 ATPase, H+ transporting, ly... XM_017320194.1 61.5% 65.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1119
ORF length:
1050
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCTCGAAGGT GCGGAGCTGT ACTTCAACGT GGACCATGGC TACCTGGAGG
121GCCTGGTTCG AGGATGCAAG GCCAGCCTCC TGACCCAGCA AGACTATATC AACCTGGTCC
181AGTGTGAGAC CCTAGAAGAC CTGAAAATTC ATCTCCAGAC TACTGATTAT GGTAACTTTT
241TGGCTAATCA CACAAATCCT CTTACTGTTT CCAAAATTGA CACTGAGATG AGGAAAAGAC
301TATGTGGAGA ATTTGAGTAT TTCCGGAATC ATTCCCTGGA GCCCCTCAGC ACATTTCTCA
361CCTATATGAC GTGCAGTTAT ATGATAGACA ATGTGATTCT GCTGATGAAT GGTGCATTGC
421AGAAAAAATC TGTGAAAGAA ATTCTGGGGA AGTGCCACCC CTTGGGCCGT TTCACAGAAA
481TGGAAGCTGT CAACATTGCA GAGACACCTT CAGATCTCTT TAATGCCATT CTGATCGAAA
541CGCCATTAGC TCCATTCTTC CAAGACTGCA TGTCTGAAAA TGCTCTAGAT GAACTGAATA
601TTGAATTGCT ACGCAATAAA CTATACAAGT CTTACCTTGA GGCATTCTAT AAATTCTGTA
661AGAATCATGG TGATGTCACA GCAGAAGTTA TGTGTCCCAT TCTTGAGTTT GAGGCCGACA
721GACGTGCTTT TATCATCACT CTTAACTCCT TTGGCACTGA ATTGAGCAAA GAAGACCGAG
781AGACCCTCTA TCCAACCTTC GGCAAACTCT ATCCTGAGGG GTTGCGGCTG TTGGCTCAAG
841CAGAAGACTT TGACCAGATG AAGAACGTAG CGGATCATTA CGGAGTATAC AAACCTTTAT
901TTGAAGCTGT AGGTGGCAGT GGGGGAAAGA CATTGGAGGA CGTGTTTTAC GAGCGTGAGG
961TACAAATGAA TGTGCTGGCA TTCAACAGAC AGTTCCACTA CGGTGTGTTT TATGCATATG
1021TAAAGCTGAA GGAACAGGAA ATTAGAAATA TTGTGTGGAT AGCAGAATGT ATTTCACAGA
1081GGCATCGAAC TAAAATCAAC AGTTACATTC CAATTTTATT GCCAACTTTC TTGTACAAAG
1141TTGGcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)