Construct: ORF ccsbBroadEn_05356

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016181.1_s300c1, BRDN0000387097
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GAS2L3 (283431)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 283431 GAS2L3 growth arrest specific 2 li... NM_001303130.2 99.9% 100% 862T>C
2 human 283431 GAS2L3 growth arrest specific 2 li... NM_001363672.2 99.9% 100% 862T>C
3 human 283431 GAS2L3 growth arrest specific 2 li... NM_174942.3 99.9% 100% 862T>C
4 human 283431 GAS2L3 growth arrest specific 2 li... XM_005268804.3 99.9% 100% 862T>C
5 human 283431 GAS2L3 growth arrest specific 2 li... XM_011538220.2 99.9% 100% 862T>C
6 human 283431 GAS2L3 growth arrest specific 2 li... XM_011538221.2 99.9% 100% 862T>C
7 human 283431 GAS2L3 growth arrest specific 2 li... XM_017019206.1 99.9% 100% 862T>C
8 human 283431 GAS2L3 growth arrest specific 2 li... NM_001303131.1 84.9% 85% 0_1ins312;550T>C
9 mouse 237436 Gas2l3 growth arrest-specific 2 li... NM_001284344.1 45.2% 47.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2148
ORF length:
2082
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCA GCCTGCAATT CAAGTATGGT TTGGAGAAGA TCTGCCTCTA AGTCCTCGGA
121GTCCTCTGAC TCCCAGACAC GGACCAGGAT TGGCTAATGT TTGTCAGTAC GATGAGTGGA
181TAGCTGTGAG GCATGAAGCC ACTTTGTTGC CCATGCAAGA AGATCTGTCA ATCTGGTTAT
241CTGGTTTATT AGGTATTAAA GTTAAGGCAG AAAAATTATT GGAAGAACTT GATAATGGAG
301TACTATTATG TCAACTGATT GATGTTCTTC AAAACATGGT GAAAACATGC AACTCTGAAG
361AATCAGGGAA TTTTCCAATG AGAAAAGTGC CCTGTAAGAA AGATGCTGCA TCAGGTTCAT
421TCTTTGCTCG GGACAATACC GCAAACTTCC TTCACTGGTG TAGGGACATT GGGGTTGATG
481AAACTTACCT CTTTGAATCT GAAGGTTTAG TTTTGCACAA AGATCCAAGA CAGGTGTATC
541TTTGTCTTCT TGAAATTGGT CGAATTGTGT CAAGATACGG GGTTGAGCCA CCAGTGTTAG
601TAAAACTTGA GAAAGAAATT GAGTTAGAAG AGACTTTGCT TAATACTTCT GGGCCTGAAG
661ATTCCATCAG CATTCCAAAA TCATGCTGTC GGCATGAAGA GCTACATGAA GCTGTTAAAC
721ATATTGCTGA GGACCCTCCT TGTAGTTGTT CTCATCGATT TTCTATTGAG TATTTATCTG
781AAGGACGGTA CCGACTAGGG GATAAAATAC TCTTTATAAG AATGCTTCAT GGAAAACATG
841TCATGGTTCG CGTTGGTGGA GGCTGGGATA CTCTTCAAGG ATTTTTGCTT AAATATGACC
901CCTGTCGAAT ATTACAGTTT GCCACACTAG AACAAAAAAT TTTAGCATTT CAAAAAGGAG
961TTTCTAATGA AAGTGTACCT GATTCGCCTG CCAGAACACC TCAGCCTCCT GAAATGAATC
1021CTTTGTCAGC AGTTAACATG TTTCAGAAAC AAAATTCAAA ACCCAGCGTG CCAGTTAGTA
1081TTCCAAAAAG CAAAGAAAAA CAGGGACGTC CACCAGGTGC ATTGGTGCCA GCATCTTCAC
1141TGAAAGGAGG TAATCTGGGC TCTATGTCAG TCCGTTCTAA ATTGCCAAAT TCTCCAGCAG
1201CATCTTCTCA TCCCAAGCTC AAGTCTTCAA AAGGCATAAC GAAGAAACCG CAGGCTCCTT
1261CAAACAATGC ATCATCTTCA CTTGCTTCAT TAAATCCAGT AGGTAAAAAC ACTTCTTCAC
1321CAGCTTTACC AAGAACTGCA CCTTGTATAT CTGAGTCACC GAGAAAATGT ATTTCATCCC
1381CCAATACCCC CAAGGCCAAG GTTATTCCAG CCCAGAATTC AGCAGATCTG CCCGAGTCCA
1441CACTTTTGCC AAATAAGTGT TCAGGAAAAA CTCAACCTAA GTATTTGAAA CATAATCATA
1501TTTCTTCCAG AGATAATGCA GTATCTCACT TAGCTGCACA TTCAAATTCA TCCTCAAAAT
1561GTCCCAAGCT GCCTAAAGCA AATATACCTG TAAGACCTAA ACCTTCTTTC CAGTCCTCTG
1621CAAAAATGAC AAAAACCAGT TCCAAAACCA TAGCCACGGG TCTAGGAACA CAGTCTCAAC
1681CATCCGATGG AGCCCCACAA GCAAAGCCAG TCCCAGCACA GAAACTTAAA TCGGCCTTGA
1741ATTTAAATCA GCCAGTTTCT GTGTCCTCAG TTTCTCCTGT AAAAGCCACA CAGAAATCAA
1801AAGATAAGAA TATAGTTTCA GCTACCAAAA AGCAGCCTCA GAATAAAAGT GCATTTCAGA
1861AGACAGGACC CAGCTCCTTG AAGTCTCCTG GCCGTACCCC ACTGTCCATC GTGAGCCTAC
1921CCCAGTCTTC TACCAAAACA CAAACTGCAC CGAAGTCAGC ACAGACTGTC GCTAAGAGCC
1981AGCATTCAAC TAAAGGGCCT CCCAGAAGTG GCAAAACCCC AGCTTCAATC AGGAAACCAC
2041CCTCATCTGT TAAGGATGCA GATAGTGGAG ATAAAAAACC TACTGCAAAG AAAAAGGAAG
2101ATGATGACCA TTATTTTGTC ATGACTGGAA GTAAGAAACC TAGAAAATAC CCAACTTTCT
2161TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)

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