Construct: ORF ccsbBroadEn_05370

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011424.1_s300c1, BRDN0000456218
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MILR1 (284021)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 284021 MILR1 mast cell immunoglobulin li... NM_001085423.2 100% 100%
2 human 284021 MILR1 mast cell immunoglobulin li... NM_001369493.1 100% 100%
3 human 284021 MILR1 mast cell immunoglobulin li... XM_024450706.1 89% 89% 1_126del
4 human 284021 MILR1 mast cell immunoglobulin li... XM_024450707.1 89% 89% 1_126del
5 human 284021 MILR1 mast cell immunoglobulin li... XM_024450708.1 89% 89% 1_126del
6 human 284021 MILR1 mast cell immunoglobulin li... XM_024450709.1 89% 89% 1_126del
7 human 284021 MILR1 mast cell immunoglobulin li... XM_017024487.1 82.9% 82.7% 0_1ins174;2T>A
8 human 284021 MILR1 mast cell immunoglobulin li... NM_001291317.2 73.7% 73.7% 96_97ins270
9 human 284021 MILR1 mast cell immunoglobulin li... XR_002957990.1 72.5% 1_147del;1177_1419del
10 human 284021 MILR1 mast cell immunoglobulin li... NM_001291316.2 72.3% 72.3% 366_367ins285
11 human 284021 MILR1 mast cell immunoglobulin li... XR_002957989.1 69.7% 1_147del;1177_1475del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1098
ORF length:
1029
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GTGGAGCCAT TTGAACAGGC TCCTCTTCTG GAGCATATTT TCTTCTGTCA
121CTTGTAGAAA AGCTGTATTG GATTGTGAGG CAATGAAAAC AAATGAATTC CCTTCTCCAT
181GTTTGGACTC AAAGACTAAG GTGGTTATGA AGGGTCAAAA TGTATCTATG TTTTGTTCCC
241ATAAGAACAA ATCACTGCAG ATCACCTATT CATTGTTTCG ACGTAAGACA CACCTGGGAA
301CCCAGGATGG AAAAGGTGAA CCTGCGATTT TTAACCTAAG CATCACAGAA GCCCATGAAT
361CAGGCCCCTA CAAATGCAAA GCCCAAGTTA CCAGCTGTTC AAAATACAGT CGTGACTTCA
421GCTTCACGAT TGTCGACCCG GTGACTTCCC CAGTGCTGAA CATTATGGTC ATTCAAACAG
481AAACAGACCG ACATATAACA TTACATTGCC TCTCAGTCAA TGGCTCGCTG CCCATCAATT
541ACACTTTCTT TGAAAACCAT GTTGCCATAT CACCAGCTAT TTCCAAGTAT GACAGGGAGC
601CTGCTGAATT TAACTTAACC AAGAAGAATC CTGGAGAAGA GGAAGAGTAT AGGTGTGAAG
661CTAAAAACAG ATTGCCTAAC TATGCAACAT ACAGTCACCC TGTCACCATG CCCTCAACAG
721GCGGAGACAG CTGTCCTTTC TGTCTGAAGC TACTACTTCC AGGGTTATTA CTGTTGCTGG
781TGGTGATAAT CCTAATTCTG GCTTTTTGGG TACTGCCCAA ATACAAAACA AGAAAAGCTA
841TGAGAAATAA TGTGCCCAGG GACCGTGGAG ACACAGCCAT GGAAGTTGGA ATCTATGCAA
901ATATCCTTGA AAAACAAGCA AAGGAGGAAT CTGTGCCAGA AGTGGGATCC AGGCCGTGTG
961TTTCCACAGC CCAAGATGAG GCCAAACACT CCCAGGAGCT ACAGTATGCC ACCCCCGTGT
1021TCCAGGAGGT GGCACCAAGA GAGCAAGAAG CCTGTGATTC TTATAAATCT GGATATGTCT
1081ATTCTGAACT CAACTTCTTG CCAACTTTCT TGTACAAAGT TGGcattata agaaagcatt
1141gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)